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WormBase Tree Display for Gene: WBGene00051561

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Name Class

WBGene00051561SMapS_parentSequenceCrem_Contig0
IdentityVersion4
NameSequence_nameCRE00193
Molecular_nameCRE00193
CRE00193.1
RP00310
Other_namecr01.sctg0.wum.556
Cre-tag-275
Public_nameCRE00193
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-tag-275
303 Jul 2008 11:44:25WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00193
Other_namecr01.sctg0.wum.556
403 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000045.61769From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
6.61831From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
7.61892From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002710.9247From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
11.1627From_analysisRNASeq.remanei.WBls:0000027.control_median
11.4007From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
12.0623From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
3.31832From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
9.42651From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:000003813.1825From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
13.8959From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
1.99115From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
9.68985From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:00000410.603733From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.809517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.918898From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.934328From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.937184From_analysisRNASeq.remanei.WBls:0000041.control_median
0.95547From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.972571From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.34578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (11)
WBls:00001011.21352From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.73341From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00146808
00146809
00146810
Ortholog (28)
ParalogWBGene00051286Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00051257Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060001Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063439Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065291Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066068Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00077875Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Is an ortholog of C. elegans tag-275.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00193
Corresponding_transcriptCRE00193.1
Other_sequenceCGC01349_1
Oden_isotig24065
MA02913
JI168413.1
MAC02864_1
CGC00811_1
JI462346.1
Experimental_infoExpr_patternExpr1103656
Microarray_resultsGPL14146_CRE00193_1175-1234_0.950_1_C
GPL14146_CRE00193_401-460_0.690_75_A
GPL14146_CRE00193_574-633_0.862_17_B
MethodGene