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WormBase Tree Display for Gene: WBGene00077875

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Name Class

WBGene00077875SMapS_parentSequenceCrem_Contig0
IdentityVersion1
NameSequence_nameCRE00042
Molecular_nameCRE00042
CRE00042.1
RP36247
Public_nameCRE00042
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000040From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
RNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:0000024 (48)
WBls:00000271.12132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.39243From_analysisRNASeq.remanei.WBls:0000027.control_median
1.6184From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.66355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
3.68873From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.45417From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.34162From_analysisRNASeq.remanei.WBls:0000038.control_mean
5.78867From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
9.78203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.31814From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.35807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.5212From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.76322From_analysisRNASeq.remanei.WBls:0000041.control_median
1.90498From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.00525From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
2.58792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.63927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000631.11336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
1.19687From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1.32973From_analysisRNASeq.remanei.WBls:0000063.control_median
1.46259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
1.764From_analysisRNASeq.remanei.WBls:0000063.control_mean
1.92761From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
2.32893From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
4.07779From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
5.53284From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
WBls:00001011.41033From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.9834From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00169435
00169436
00169437
Ortholog (12)
ParalogWBGene00051257Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00051561Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060001Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063439Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065291Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066068Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00042
Corresponding_transcriptCRE00042.1
Other_sequenceSS02619
SSC04409_1
Experimental_infoExpr_patternExpr1105954
Microarray_resultsGPL14146_CRE00042_57-116_0.896_42_A
MethodGene