WormBase Tree Display for Gene: WBGene00059606

WBGene00059606 SMap: S_parent: Sequence: Crem_Contig75
  Identity: Version: 7
    Name: CGC_name: Cre-rgs-4 From_analysis: Inferred_from_orthology
      Sequence_name: CRE24563
      Molecular_name: CRE24563
        CRE24563.1
        RP12366
      Other_name: cr01.sctg15.wum.52
        Cre-rgs-4.1 From_analysis: Inferred_from_orthology
      Public_name: Cre-rgs-4
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-rgs-4
        3 03 Jul 2008 11:45:25 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE24563
                Other_name: cr01.sctg15.wum.52
        4 27 Nov 2019 12:48:15 WBPerson1983 Name_change: CGC_name: Removed
        5 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Cre-rgs-4
        6 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cre-rgs-4.1
                Other_name: Cre-rgs-4
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cre-rgs-4
                Other_name: Cre-rgs-4.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rgs
    RNASeq_FPKM: WBls:0000004 4.54086 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        6.73846 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        8.93606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 105.007 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        105.58 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        18.8746 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        19.435 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        23.8723 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        24.8067 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        25.8107 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        29.2461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        33.211 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        33.5665 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        34.4746 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        36.8152 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        39.0863 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        42.7491 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        42.7709 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        43.4463 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        44.7988 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        46.4237 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        46.5534 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        46.8475 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        46.9027 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        48.6985 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        50.964 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        51.8944 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        52.5766 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        53.4456 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        55.0995 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        55.4027 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        55.7228 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        56.3495 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        56.8498 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        59.314 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        59.3594 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        59.992 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        62.0097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        62.5082 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        62.6998 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        66.3978 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        66.5579 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        69.7347 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        71.3378 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        71.8465 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        74.4793 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        75.6993 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        77.15 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        77.2807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        77.3896 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        79.4891 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        80.984 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        81.5578 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        84.0698 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        86.7092 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        88.6093 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
      WBls:0000027 13.4594 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        22.1833 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        26.6567 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        28.3122 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        34.4411 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        36.5429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 10.2215 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        17.9179 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        20.6164 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        22.9157 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 11.7452 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        11.9818 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        17.7841 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        18.638 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        18.6492 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        4.01271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        5.20773 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        6.1795 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 11.9218 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        13.7151 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        16.3229 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        16.669 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        23.0068 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        23.0999 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        2.3998 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        31.4661 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        3.15296 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        6.02274 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        7.49037 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        7.52076 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
      WBls:0000101 14.6723 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        14.8912 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog: WBGene00004347 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00004350 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00004351 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00004352 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00004353 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00004354 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021988 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00031745 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00113522 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00132514 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00148896 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00147994 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00151582 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129549 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g6323 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15518 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14925 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15922 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13112 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16953 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16038 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14310 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3921 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3909 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00811.g14302 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-rgs-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14953 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00647.g13980 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16919 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_007140 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12568 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20032100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6236 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00051158 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051966 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00085237 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00072351 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00068120 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051629 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00052543 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00079878 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: RGS domain; RGS domain superfamily; and Regulator of G protein signaling domain. Is an ortholog of C. elegans rgs-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE24563
    Corresponding_transcript: CRE24563.1
    Other_sequence: BG467730.1
      FC551322.1
      EY470679.1
      EY462654.1
      FC549819.1
      Acan_isotig04280
      CJC13447_1
      AE00624
      Dviv_isotig09352
      JI211268.1
      Hbac_isotig06584
      NAC00476_1
      EY466023.1
      Dviv_isotig09350
      EY462254.1
      CR01462
      EY463661.1
      EY465347.1
      Dviv_isotig09348
      EY466853.1
      EY462083.1
      EY462603.1
      EY473326.1
      CRC05742_1
      EY459963.1
      Dviv_isotig09349
      EY465167.1
      FC550458.1
      ACC31755_1
      ACC07776_2
      EY463501.1
      AYC02316_1
      EX541420.1
      Oden_isotig19435
      EY458615.1
      JI220824.1
  Experimental_info: Expr_pattern: Expr1094072
    Microarray_results: GPL14146_CRE24563_359-418_0.865_21_B
      GPL14146_CRE24563_452-511_0.958_1_C
      GPL14146_CRE24563_562-621_0.948_2_A
  Remark: [191127 pad] The CGC name Cre-rgs-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene