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WormBase Tree Display for Gene: WBGene00053790

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Name Class

WBGene00053790SMapS_parentSequenceCrem_Contig1
IdentityVersion7
NameCGC_nameCre-unc-105From_analysisInferred_from_orthology
Sequence_nameCRE02017
Molecular_nameCRE02017
CRE02017.1
RP34711
Other_namecr01.sctg2.wum.568
Public_nameCre-unc-105
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:44WBPerson2970Name_changeCGC_nameCre-unc-105
303 Jul 2008 11:44:45WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE02017
Other_namecr01.sctg2.wum.568
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:22WBPerson1983Name_changeCGC_nameCre-unc-105
628 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:27WBPerson1983Name_changeCGC_nameCre-unc-105
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.293492From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.792236From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.29098From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:00000241.16454From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
1.19006From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
1.19344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
1.31145From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
1.35681From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
1.41625From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
1.47667From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
1.5348From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
1.70755From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
1.75739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
1.76445From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
1.89225From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
2.08157From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
2.09572From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
2.32095From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
2.35871From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
2.41827From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
2.42274From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
2.47503From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
2.50833From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
2.52354From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
2.72603From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
2.72744From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
2.74343From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
2.75835From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
2.78184From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
2.7939From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
2.90565From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
3.17021From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
3.18026From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
3.21881From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
3.23301From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
3.26245From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
3.32541From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
3.61955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
3.64758From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
3.70336From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
3.83395From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
4.25224From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
4.30183From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
4.57429From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
4.66823From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
5.03871From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
5.20022From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
5.3388From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
6.01196From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
6.10136From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
6.53153From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
6.6942From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
7.44844From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
7.8535From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
8.50203From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
9.71065From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
WBls:00000270.238122From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
5.32111From_analysisRNASeq.remanei.WBls:0000027.control_mean
6.77643From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
6.78887From_analysisRNASeq.remanei.WBls:0000027.control_median
6.80131From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
7.46857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:00000380.723353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
4.59552From_analysisRNASeq.remanei.WBls:0000038.control_mean
5.62147From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
7.44175From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.01165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.50336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.57182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.70176From_analysisRNASeq.remanei.WBls:0000041.control_median
1.74155From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.8317From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
1.92584From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.60493From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:00000630.708755From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
0.730092From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
0.806548From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0.832155From_analysisRNASeq.remanei.WBls:0000063.control_median
0.857761From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1.47561From_analysisRNASeq.remanei.WBls:0000063.control_mean
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
2.10712From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
2.58946From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
2.75777From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
4.19863From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
WBls:00001011.53759From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.37927From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00149046
00149047
00149048
00149049
00149050
OrthologWBGene00006832Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00020897Caenorhabditis elegansFrom_analysisTreeFam
WBGene00024093Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00193948Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193474Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00212193Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00161303Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00222950Brugia malayiFrom_analysisWormBase-Compara
WBGene00247051Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00099877Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g6823Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16118Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6515Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12831Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6442Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9396Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3445Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13214Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6617Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19243Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00115.g4756Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02515.g17272Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-105Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18496Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01896.g23753Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08787Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09363Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20789Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20152800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5163Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00265038Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00051265Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00051949Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00065508Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00054087Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00068679Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00077241Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00066166Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00083081Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00065424Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00070297Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00056478Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00062353Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00062351Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00058370Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058565Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058725Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059327Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059770Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062046Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064062Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065039Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065049Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00065449Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071684Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068739Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00069821Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00071962Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-105. In C. elegans, unc-105 is involved in calcium ion transport; magnesium ion transport; and muscle organ development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE02017
Corresponding_transcriptCRE02017.1
Other_sequenceOden_isotig26078
MH07095
Oden_isotig19678
JI175583.1
JI170191.1
Name_isotig03641
Dviv_isotig27200
GO239869.1
Experimental_infoExpr_patternExpr1105243
Microarray_resultsGPL14146_CRE02017_1989-2048_0.892_25_A
GPL14146_CRE02017_2095-2154_0.923_9_B
GPL14146_CRE02017_2184-2243_0.711_240_C
Remark[190208 pad] The CGC name Cre-unc-105 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cre-unc-105 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene