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WormBase Tree Display for Gene: WBGene00054087

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Name Class

WBGene00054087SMapS_parentSequenceCrem_Contig6
IdentityVersion3
NameCGC_nameCre-del-10From_analysisInferred_from_orthology
Sequence_nameCRE26273
Molecular_nameCRE26273
CRE26273.1
RP36797
Other_namecr01.sctg3.wum.108
Public_nameCre-del-10
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:47WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE26273
Other_namecr01.sctg3.wum.108
324 Feb 2012 15:38:17WBPerson2970Name_changeCGC_nameCre-del-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdel
RNASeq_FPKMWBls:00000040.339009From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0.428566From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.518123From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.688027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
10.2929From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
5.97836From_analysisRNASeq.remanei.WBls:0000027.control_mean
5.98951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
6.46625From_analysisRNASeq.remanei.WBls:0000027.control_median
6.94299From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
WBls:00000380.232227From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.03314From_analysisRNASeq.remanei.WBls:0000038.control_mean
7.16689From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
7.70031From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000411.57531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.95555From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.95639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.56985From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.57644From_analysisRNASeq.remanei.WBls:0000041.control_median
3.19649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
3.36718From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
3.3682From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001012.62157From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.26216From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00149406
00149407
00149408
Ortholog (51)
Paralog (24)
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-10.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE26273
Corresponding_transcriptCRE26273.1
Other_sequence (13)
Experimental_infoExpr_patternExpr1098895
Microarray_resultsGPL14146_CRE26273_2179-2238_0.917_9_C
GPL14146_CRE26273_2498-2557_0.934_6_B
GPL14146_CRE26273_2577-2636_0.928_7_A
MethodGene