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WormBase Tree Display for Gene: WBGene00052466

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Name Class

WBGene00052466SMapS_parentSequenceCrem_Contig5
IdentityVersion4
NameSequence_nameCRE27381
Molecular_nameCRE27381
CRE27381.1
RP23676
Other_namecr01.sctg1.wum.342
Public_nameCRE27381
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:34WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE27381
Other_namecr01.sctg1.wum.342
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-his-11.2
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000410.7284From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
5.8576From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
8.293From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
WBls:00000240.213148From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
0.335443From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
0.363998From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
0.441953From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
0.524534From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
0.532288From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
0.560385From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
0.593223From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
0.6326From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
0.673063From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
0.727983From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
0.746808From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
0.819081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
0.81992From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
0.849782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
0.895016From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
1.12367From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
1.15098From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
1.35338From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
1.78497From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
0From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
4.22711From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
6.66221From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
7.06803From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
WBls:000002714.5314From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.09586From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.5392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
8.47396From_analysisRNASeq.remanei.WBls:0000027.control_median
9.1438From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.40872From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.43332From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.28898From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.57117From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.9912From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.039415From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.061417From_analysisRNASeq.remanei.WBls:0000041.control_median
0.083418From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.090483From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.19574From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.224322From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
RNASeq.remanei.WBls:0000063.control_mean
RNASeq.remanei.WBls:0000063.control_median
WBls:00001010.019708From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.36221From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147733
00147734
00147735
00147736
OrthologWBGene00001878Caenorhabditis elegansFrom_analysisOMA
WBGene00001885Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00001908Caenorhabditis elegansFrom_analysisOMA
WBGene00001915Caenorhabditis elegansFrom_analysisOMA
WBGene00001928Caenorhabditis elegansFrom_analysisOMA
WBGene00032089Caenorhabditis briggsaeFrom_analysisOMA
WBGene00038550Caenorhabditis briggsaeFrom_analysisOMA
WBGene00041801Caenorhabditis briggsaeFrom_analysisOMA
WBGene00164007Caenorhabditis brenneriFrom_analysisOMA
WBGene00213692Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00214753Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00219199Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00211534Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00219079Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00142164Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00139223Caenorhabditis brenneriFrom_analysisOMA
WBGene00141387Caenorhabditis brenneriFrom_analysisOMA
WBGene00115915Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00155506Caenorhabditis brenneriFrom_analysisOMA
WBGene00138989Caenorhabditis brenneriFrom_analysisOMA
WBGene00212957Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00239923Onchocerca volvulusFrom_analysisWormBase-Compara
GCK72_018864Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g10642Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g19836Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23095Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00257118Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257583Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257754Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260310Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261392Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261603Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286204Trichuris murisFrom_analysisWormBase-Compara
WBGene00287609Trichuris murisFrom_analysisWormBase-Compara
WBGene00288397Trichuris murisFrom_analysisWormBase-Compara
WBGene00291541Trichuris murisFrom_analysisWormBase-Compara
WBGene00292965Trichuris murisFrom_analysisWormBase-Compara
WBGene00294253Trichuris murisFrom_analysisWormBase-Compara
WBGene00295041Trichuris murisFrom_analysisWormBase-Compara
WBGene00295045Trichuris murisFrom_analysisWormBase-Compara
WBGene00295049Trichuris murisFrom_analysisWormBase-Compara
WBGene00295067Trichuris murisFrom_analysisWormBase-Compara
WBGene00295072Trichuris murisFrom_analysisWormBase-Compara
WBGene00295901Trichuris murisFrom_analysisWormBase-Compara
WBGene00296694Trichuris murisFrom_analysisWormBase-Compara
WBGene00296941Trichuris murisFrom_analysisWormBase-Compara
WBGene00296942Trichuris murisFrom_analysisWormBase-Compara
WBGene00297838Trichuris murisFrom_analysisWormBase-Compara
WBGene00298960Trichuris murisFrom_analysisWormBase-Compara
WBGene00298961Trichuris murisFrom_analysisWormBase-Compara
WBGene00299711Trichuris murisFrom_analysisWormBase-Compara
WBGene00300523Trichuris murisFrom_analysisWormBase-Compara
WBGene00300942Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00074707Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00057890Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00078979Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00080028Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00082300Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00075810Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00072529Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00053112Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00052488Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00080019Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059472Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00068704Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00052493Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-4 and his-54.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE27381
Corresponding_transcriptCRE27381.1
Other_sequenceGR17707
Acan_isotig05150
HG00456
BXC02044_1
Oden_isotig23625
MC00785
CK855479.1
GW407832.1
AE00675
GO252359.1
HG02388
DN557112.1
GO250905.1
Acan_isotig15693
Dviv_isotig01857
GR19633
MCC03885_1
GR11956
GO251087.1
AYC03308_1
GRC01126_2
CK850266.1
DN557670.1
CK850403.1
PSC00237
MC00067
CK850817.1
HGC09809_1
AI130139.1
GRC03517_1
WBC00362_1
BXC01671_1
GR18820
GR11629
Experimental_infoExpression_clusterWBPaper00054996:activated_sperm_CRE
Remark[190208 pad] The CGC name Cre-his-11.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene