WormBase Tree Display for Gene: WBGene00052488

WBGene00052488 SMap: S_parent: Sequence: Crem_Contig13
  Identity: Version: 4
    Name: Sequence_name: CRE05743
      Molecular_name: CRE05743
        CRE05743.1
        RP30116
      Other_name: cr01.sctg1.wum.364
      Public_name: CRE05743
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:35 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE05743
                Other_name: cr01.sctg1.wum.364
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-his-11.1
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 3.84313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        4.51092 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.17871 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (50)
      WBls:0000027 11.0108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        13.0524 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.77679 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.65318 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        9.62329 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        9.83199 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 14.0809 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        18.0002 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        19.7286 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        4.51377 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.012895 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.077371 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
            RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
            RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
            RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
            RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
            RNASeq.remanei.WBls:0000041.control_median
      WBls:0000063 0.230918 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.288079 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.04876 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        1.60111 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.038686 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.56599 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00147765
      00147766
      00147767
      00147768
    Ortholog (53)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-4 and his-54. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE05743
    Corresponding_transcript: CRE05743.1
    Other_sequence (25)
  Experimental_info: Expr_pattern: Expr1101307
    Microarray_results: GPL14146_CRE05547_93-152_0.930_12_A
    Expression_cluster: WBPaper00054996:activated_sperm_CRE
  Remark: [190208 pad] The CGC name Cre-his-11.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene