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WormBase Tree Display for Gene: WBGene00051839

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Name Class

WBGene00051839SMapS_parentSequenceCrem_Contig0
IdentityVersion3
NameCGC_nameCre-dpy-23From_analysisInferred_from_orthology
Sequence_nameCRE00819
Molecular_nameCRE00819
CRE00819.1
RP15405
Other_namecr01.sctg0.wum.827
Public_nameCre-dpy-23
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:49WBPerson2970Name_changeCGC_nameCre-dpy-23
303 Jul 2008 11:44:28WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE00819
Other_namecr01.sctg0.wum.827
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:000000430.8663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
36.6268From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
42.3873From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:000002417.6671From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
18.1412From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
19.3283From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
20.2311From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
22.6531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
26.5888From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
27.2943From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
27.4517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
27.5075From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
27.9044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
28.0685From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
28.1729From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
29.0851From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
29.2367From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
29.3745From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
29.7079From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
29.9127From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
30.6508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
31.4518From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
31.7351From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
33.0263From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
33.1309From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
33.2583From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
33.5245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
34.938From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
35.1762From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
35.2149From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
36.1822From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
36.2327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
36.7285From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
36.8113From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
37.0778From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
37.1355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
37.5899From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
38.9894From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
39.4377From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
39.7326From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
40.3878From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
40.43From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
41.2869From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
41.3217From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
41.449From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
41.6714From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
42.346From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
43.3796From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
44.0647From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
44.3886From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
45.1299From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
47.9595From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
51.4948From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
52.9793From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
58.3846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
60.9786From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
WBls:000002713.9699From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
36.9134From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
39.8273From_analysisRNASeq.remanei.WBls:0000027.control_mean
43.9821From_analysisRNASeq.remanei.WBls:0000027.control_median
51.0508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
57.3749From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003810.5749From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
23.2559From_analysisRNASeq.remanei.WBls:0000038.control_mean
26.9766From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
32.2161From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004116.2993From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
17.3154From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
17.9307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
19.7813From_analysisRNASeq.remanei.WBls:0000041.control_mean
19.9049From_analysisRNASeq.remanei.WBls:0000041.control_median
21.8792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
21.9673From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
23.296From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:000006311.3287From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
11.7344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
12.4075From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
13.1507From_analysisRNASeq.remanei.WBls:0000063.control_mean
13.7387From_analysisRNASeq.remanei.WBls:0000063.control_median
15.0699From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
15.4112From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
16.8795From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
17.2947From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
18.8973From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
5.00355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
7.47995From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
WBls:000010117.305From_analysisRNASeq.remanei.total_over_all_stages.control_median
21.2509From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147087
00147088
00147089
OrthologWBGene00001082Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00034945Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00154920Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00095686Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00119617Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00234051Brugia malayiFrom_analysisWormBase-Compara
WBGene00241681Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g3286Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14982Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9654Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19126Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15464Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8897Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8454Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g26650Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11543Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00547.g12092Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-dpy-23Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00002.g147Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00674Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024256Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04790Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14697Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0256800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18913Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266334Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00055921Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060042Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060198Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00070363Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans dpy-23. In C. elegans, dpy-23 is involved in several processes, including necroptotic process; positive regulation of Wnt protein secretion; and protein localization to non-motile cilium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE00819
Corresponding_transcriptCRE00819.1
Other_sequenceXIC03789_1
BXC02791_1
CR08388
SS02461
PPC04833_1
JI480087.1
FG583491.1
Dviv_isotig27127
Dviv_isotig34199
FG350579.1
HCC00074_1
HC05931
HC04682
Tcir_isotig06748
SC01527
MHC10602_1
AAC00534_1
DN190516.1
CBC16987_1
TM01329
HC02810
HG09090
FE910710.1
ACC40429_1
FG348023.1
SSC01389_1
FG351711.1
FG583046.1
Tcir_isotig06553
MH02944
ES566460.1
JI176527.1
FG347335.1
ASC31553_1
Hbac_isotig03417
HCC00105_1
CRC04862_1
EX501053.1
Oden_isotig13590
TSC00879_1
FG355123.1
XI03945
GR977555.1
TMC00943_1
PP00914
TV00876
FG347590.1
PPC07947_1
PPC17402_1
Dviv_isotig35908
EX500924.1
FG619173.1
MHC00008
TS00556
HCC00435_1
Hbac_isotig05654
Oden_isotig13589
FC539551.1
HC02525
MH02941
Tcol_isotig08354
FG348296.1
TVC00743_1
JI246861.1
GO251097.1
Tcol_isotig14798
FG351156.1
FG348489.1
TSC08597_1
CJC05003_1
Dviv_isotig23417
HCC00144_1
MHC03013_1
MH02943
Dviv_isotig29418
MH06580
JI171039.1
FG588244.1
HGC03902_1
Tcol_isotig08355
FG348485.1
Experimental_infoExpr_patternExpr1095898
Microarray_resultsGPL14146_CRE00819_529-588_0.907_13_C
GPL14146_CRE00819_599-658_0.904_16_B
GPL14146_CRE00819_967-1026_0.904_14_A
MethodGene