WormBase Tree Display for Gene: WBGene00060042

WBGene00060042 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-apm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29523
      Molecular_name: CRE29523
        CRE29523.1
        RP31790
      Other_name: cr01.sctg16.wum.212
      Public_name: Cre-apm-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:41 WBPerson2970 Name_change: CGC_name: Cre-apm-1
        3 03 Jul 2008 11:45:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29523
                Other_name: cr01.sctg16.wum.212
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: apm
    RNASeq_FPKM: WBls:0000004 6.72136 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        6.96172 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.20208 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 39.1417 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        48.9077 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        49.0944 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        49.2811 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        50.3202 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.05768 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 11.449 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        41.3551 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        56.0765 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        56.5398 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 12.3654 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        12.669 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        13.8929 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        28.4806 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        28.5518 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        43.2108 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        43.5198 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        45.226 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 30.8609 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        34.6731 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00155531
      00155532
      00155533
    Ortholog (25)
    Paralog: WBGene00055921 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070363 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00051839 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060198 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans apm-1. In C. elegans, apm-1 is involved in apical protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29523
    Corresponding_transcript: CRE29523.1
    Other_sequence (67)
  Experimental_info: Expr_pattern: Expr1116542
    Microarray_results: GPL14146_CRE29523_231-290_0.831_69_C
      GPL14146_CRE29523_316-375_0.854_57_A
      GPL14146_CRE29523_47-106_0.860_51_B
  Method: Gene