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WormBase Tree Display for Gene: WBGene00034945

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Name Class

WBGene00034945SMapS_parentSequencecb25.fpc3857a
IdentityVersion2
NameCGC_nameCbr-dpy-23From_analysisInferred_from_orthology
Sequence_nameCBG14461
Molecular_nameCBG14461a
CBG14461a.1
CBP25663
CBG14461b
CBP40587
CBG14461b.1
Other_nameCBG_14461Accession_evidenceNDBHE600983
Public_nameCbr-dpy-23
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-dpy-23
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:000000229.0365From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
32.0944From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
37.763From_analysisRNASeq.briggsae.WBls:0000002.control_mean
52.1581From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.3647From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
30.5655From_analysisRNASeq.briggsae.WBls:0000002.control_median
34.1634From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000343.0408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
49.387From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
55.7331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
50.8283From_analysisRNASeq.briggsae.WBls:0000003.control_mean
53.7111From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000468.0762From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
68.5344From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
68.9926From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
68.6149From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
68.7037From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
68.7843From_analysisRNASeq.briggsae.WBls:0000004.control_mean
69.534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:000002422.5007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
23.9469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
25.8301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
51.2992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
59.6441From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
62.1973From_analysisRNASeq.briggsae.WBls:0000024.control_median
64.5052From_analysisRNASeq.briggsae.WBls:0000024.control_mean
64.7506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
82.3271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
23.3976From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
24.118From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
31.0767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
WBls:000002715.9808From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
32.301From_analysisRNASeq.briggsae.WBls:0000027.control_mean
7.20934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
73.7128From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
25.9981From_analysisRNASeq.briggsae.WBls:0000027.control_median
33.2296From_analysisRNASeq.briggsae.WBls:0000027.control_mean
36.0154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003559.4424From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.9387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
28.7555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
33.0016From_analysisRNASeq.briggsae.WBls:0000038.control_mean
34.5698From_analysisRNASeq.briggsae.WBls:0000038.control_median
40.384From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
49.9281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004114.4017From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
14.488From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
14.7825From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.0151From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.0771From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
16.0936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
15.1855From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.2539From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.4307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
15.6221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006311.3373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
11.5985From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
8.08909From_analysisRNASeq.briggsae.WBls:0000063.control_mean
8.09956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
9.41007From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
10.0833From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.3737From_analysisRNASeq.briggsae.WBls:0000063.control_median
20.0542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010129.0365From_analysisRNASeq.briggsae.total_over_all_stages.control_median
34.3452From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
30.5655From_analysisRNASeq.briggsae.total_over_all_stages.control_median
35.9753From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138417
00138418
00138419
OrthologWBGene00001082Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00051839Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00154920Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00095686Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00119617Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g3286Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14982Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9654Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19126Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15464Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8897Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8454Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g26650Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11543Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00547.g12092Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-dpy-23Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00002.g147Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00674Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024256Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04790Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14697Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0256800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00234051Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18913Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241681Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266334Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00029947Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030469Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033291Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038645Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans dpy-23. In C. elegans, dpy-23 is involved in several processes, including necroptotic process; positive regulation of Wnt protein secretion; and protein localization to non-motile cilium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14461a
CBG14461b
Corresponding_CDS_historyCBG14461:bp194
Corresponding_transcriptCBG14461a.1
CBG14461b.1
Other_sequenceBXC02791_1
CR08388
SS02461
PPC04833_1
Dviv_isotig34199
Tcir_isotig06748
SC01527
MHC10602_1
AAC00534_1
DN190516.1
CBC16987_1
TM01329
HC02810
HG09090
ACC40429_1
SSC01389_1
MHC10601_1
Tcir_isotig06553
MH02944
ES566460.1
Hbac_isotig03417
CRC04862_1
EX501053.1
Oden_isotig13590
TSC00879_1
GR977555.1
TMC00943_1
PP00914
TV00876
PPC07947_1
PPC17402_1
EX500924.1
MHC00008
TS00556
HCC00435_1
Hbac_isotig05654
Oden_isotig13589
FC539551.1
MH02941
Tcol_isotig08354
TVC00743_1
MH02940
GO251097.1
Tcol_isotig14798
TSC08597_1
CJC05003_1
Dviv_isotig23417
MHC03013_1
MH02943
Dviv_isotig29418
MH06580
JI171039.1
HGC03902_1
Tcol_isotig08355
Experimental_infoExpr_patternExpr1061375
Microarray_resultsGPL8303_CB6_WBGene00034945_A
GPL8303_CB6_WBGene00034945_B
GPL14143_CBG14461_491-550_0.791_14_C
GPL14143_CBG14461_599-658_0.784_20_B
GPL14143_CBG14461_969-1028_0.810_6_A
Expression_clusterWBPaper00059178:Cbr-htz-1(gu167)_downregulated
MethodGene