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WormBase Tree Display for Gene: WBGene00033291

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Name Class

WBGene00033291SMapS_parentSequencecb25.fpc2887d2
IdentityVersion2
NameCGC_nameCbr-apm-1From_analysisInferred_from_orthology
Sequence_nameCBG12329
Molecular_nameCBG12329
CBG12329.1
CBP38899
Other_nameCBG_12329Accession_evidenceNDBHE600913
Public_nameCbr-apm-1
DB_infoDatabaseNDBlocus_tagCBG_12329
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-apm-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classapm
RNASeq_FPKMWBls:000000213.4891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
26.3803From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
34.6535From_analysisRNASeq.briggsae.WBls:0000002.control_mean
64.0911From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
20.277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
23.3286From_analysisRNASeq.briggsae.WBls:0000002.control_median
31.0594From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000310.3232From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
11.8737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
8.77264From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
10.5087From_analysisRNASeq.briggsae.WBls:0000003.control_mean
10.8797From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000456.4084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
59.8773From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
63.3461From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
53.8806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
55.2974From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
61.0182From_analysisRNASeq.briggsae.WBls:0000004.control_mean
76.1584From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000272.48025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
26.5519From_analysisRNASeq.briggsae.WBls:0000027.control_mean
67.734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
9.44142From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.396From_analysisRNASeq.briggsae.WBls:0000027.control_median
26.7516From_analysisRNASeq.briggsae.WBls:0000027.control_mean
27.3506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003522.6575From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.1546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
21.9761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
23.3083From_analysisRNASeq.briggsae.WBls:0000038.control_median
24.6405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
37.5378From_analysisRNASeq.briggsae.WBls:0000038.control_mean
92.3799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004113.548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
14.915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.6136From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.3121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
22.1592From_analysisRNASeq.briggsae.WBls:0000041.control_mean
41.8616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
28.368From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.5378From_analysisRNASeq.briggsae.WBls:0000041.control_mean
38.4238From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
44.1665From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006324.5045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
27.5764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
29.0122From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
31.3996From_analysisRNASeq.briggsae.WBls:0000063.control_mean
37.2303From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
38.6747From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.1056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
28.2943From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.5173From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010124.6405From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.9271From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.8654From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.5638From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136644
00136645
00136646
Ortholog (26)
ParalogWBGene00029947Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030469Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038645Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans apm-1. In C. elegans, apm-1 is involved in apical protein localization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12329
Corresponding_CDS_historyCBG12329:bp194
CBG12329:bp255
Corresponding_transcriptCBG12329.1
Other_sequence (50)
Experimental_infoExpr_patternExpr1058762
Microarray_resultsGPL8303_CB6_WBGene00033291_A
GPL14143_CBG12329_82-141_0.874_46_B
GPL14143_CBG12329_244-303_0.872_48_C
GPL14143_CBG12329_332-391_0.881_42_A
MethodGene