WormBase Tree Display for Gene: WBGene00020556
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| WBGene00020556 | SMap | S_parent | Sequence | T19B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pamn-1 | Person_evidence | WBPerson3480 | |||||
| WBPerson6671 | |||||||||
| Sequence_name | T19B4.1 | ||||||||
| Molecular_name | T19B4.1 | ||||||||
| T19B4.1.1 | |||||||||
| CE39282 | |||||||||
| Other_name | CELE_T19B4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pamn-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 13:31:46 | WBPerson2970 | Name_change | CGC_name | pamn-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pamn | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00003078 | ||||||||
| WBStrain00037097 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00006541 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00017671 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022144 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable copper ion binding activity; peptidylamidoglycolate lyase activity; and peptidylglycine monooxygenase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region. Expressed in head ganglion and tail ganglion. Human ortholog(s) of this gene implicated in prostate adenocarcinoma. Is an ortholog of human PAM (peptidylglycine alpha-amidating monooxygenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:2526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8596) | ||||
| Molecular_info | Corresponding_CDS | T19B4.1 | |||||||
| Corresponding_CDS_history | T19B4.1:wp150 | ||||||||
| Corresponding_transcript | T19B4.1.1 | ||||||||
| Other_sequence (50) | |||||||||
| Associated_feature | WBsf983751 | ||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Chronogram975 | ||||||||
| Expr3639 | |||||||||
| Expr6713 | |||||||||
| Expr13715 | |||||||||
| Expr1017186 | |||||||||
| Expr1038959 | |||||||||
| Expr1157065 | |||||||||
| Expr2014717 | |||||||||
| Expr2032951 | |||||||||
| Drives_construct | WBCnstr00003570 | ||||||||
| WBCnstr00025055 | |||||||||
| WBCnstr00039952 | |||||||||
| Construct_product | WBCnstr00011564 | ||||||||
| WBCnstr00025055 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000115569 | ||||||||
| WBInteraction000173663 | |||||||||
| WBInteraction000278885 | |||||||||
| WBInteraction000573904 | |||||||||
| WBInteraction000574337 | |||||||||
| Map_info | Map | I | Position | 0.375252 | Error | 0.007243 | |||
| Positive | Positive_clone | T19B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056066 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
