WormBase Tree Display for Gene: WBGene00016333
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WBGene00016333 | SMap | S_parent | Sequence | C32F10 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (36) | ||||||
Strain | WBStrain00036955 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00025283 | |||||
00025284 | ||||||
00025285 | ||||||
00121971 | ||||||
00121972 | ||||||
00121973 | ||||||
Ortholog (45) | ||||||
Paralog | WBGene00009232 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00009628 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00010984 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00011436 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable L-alanine:2-oxoglutarate aminotransferase activity. Predicted to be involved in L-alanine catabolic process and biosynthetic process. Expressed in mc1 and pm3. Human ortholog(s) of this gene implicated in liver cancer; liver cirrhosis; and non-alcoholic fatty liver disease. Is an ortholog of human GPT (glutamic--pyruvic transaminase) and GPT2 (glutamic--pyruvic transaminase 2). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:9452 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4552) | |
DOID:3571 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18062,HGNC:4552) | |||
DOID:5082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4552) | |||
DOID:0080208 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18062,HGNC:4552) | |||
Molecular_info | Corresponding_CDS | C32F10.8a | ||||
C32F10.8b | ||||||
Corresponding_CDS_history | C32F10.8:wp90 | |||||
Corresponding_transcript | C32F10.8a.1 | |||||
C32F10.8a.2 | ||||||
C32F10.8a.3 | ||||||
C32F10.8b.1 | ||||||
Other_sequence (155) | ||||||
Associated_feature | WBsf649194 | |||||
WBsf983776 | ||||||
WBsf983777 | ||||||
WBsf219490 | ||||||
WBsf219491 | ||||||
Experimental_info | RNAi_result | WBRNAi00001171 | Inferred_automatically | RNAi_primary | ||
WBRNAi00003068 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082429 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00082582 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00041702 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (9) | ||||||
Drives_construct | WBCnstr00002477 | |||||
WBCnstr00004353 | ||||||
WBCnstr00028150 | ||||||
Construct_product | WBCnstr00028150 | |||||
Microarray_results (34) | ||||||
Expression_cluster (149) | ||||||
Interaction (118) | ||||||
Map_info | Positive | Positive_clone | C32F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | I | 0.465567 | ||||
Reference | WBPaper00031006 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
WBPaper00061589 | ||||||
Method | Gene |