WormBase Tree Display for Gene: WBGene00015704
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| WBGene00015704 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | tiam-1 | Paper_evidence | WBPaper00041074 | |||||
| Person_evidence | WBPerson389 | ||||||||
| Sequence_name | C11D9.1 | ||||||||
| Molecular_name | C11D9.1 | ||||||||
| C11D9.1.1 | |||||||||
| CE47735 | |||||||||
| Other_name | cgef-2 | Person_evidence | WBPerson661 | ||||||
| CELE_C11D9.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | tiam-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Aug 2010 11:56:07 | WBPerson2970 | Name_change | CGC_name | cgef-2 | ||||
| 3 | 21 Jun 2012 09:40:08 | WBPerson1849 | Event | Acquires_merge | WBGene00020654 | ||||
| 4 | 16 Apr 2013 15:47:29 | WBPerson2970 | Name_change | CGC_name | tiam-1 | ||||
| Other_name | cgef-2 | ||||||||
| Acquires_merge | WBGene00020654 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tiam | ||||||||
| Allele (202) | |||||||||
| Strain (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00006496 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00022391 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00006805 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006887 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009337 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010111 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010776 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables guanyl-nucleotide exchange factor activity. Involved in small GTPase mediated signal transduction. Located in cell periphery and growth cone. Expressed in gonad and neurons. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with language delay and seizures. Is an ortholog of human TIAM2 (TIAM Rac1 associated GEF 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070444 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11805) | ||||
| Molecular_info | Corresponding_CDS | C11D9.1 | |||||||
| Corresponding_CDS_history | C11D9.1:wp134 | ||||||||
| C11D9.1:wp232 | |||||||||
| Corresponding_transcript | C11D9.1.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature (25) | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00004043 | ||||||||
| WBCnstr00005759 | |||||||||
| WBCnstr00017480 | |||||||||
| WBCnstr00028637 | |||||||||
| Construct_product | WBCnstr00014578 | ||||||||
| WBCnstr00017481 | |||||||||
| WBCnstr00023138 | |||||||||
| WBCnstr00028637 | |||||||||
| WBCnstr00038760 | |||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | I | Position | -1.3075 | Error | 0.00121 | |||
| Positive | Positive_clone | C11D9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
