WormBase Tree Display for Gene: WBGene00015471
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WBGene00015471 | SMap | S_parent | Sequence | C05D9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | lmp-2 | Person_evidence | WBPerson298 | |||||
Sequence_name | C05D9.2 | ||||||||
Molecular_name | C05D9.2 | ||||||||
C05D9.2.1 | |||||||||
CE07928 | |||||||||
C05D9.2.2 | |||||||||
C05D9.2.3 | |||||||||
Other_name | CELE_C05D9.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lmp-2 | ||||||||
DB_info | Database | AceView | gene | XB745 | |||||
WormQTL | gene | WBGene00015471 | |||||||
WormFlux | gene | WBGene00015471 | |||||||
NDB | locus_tag | CELE_C05D9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015471|UniProtKB=Q9GYK0 | |||||||
family | PTHR11506 | ||||||||
NCBI | gene | 180467 | |||||||
RefSeq | protein | NM_001392725.1 | |||||||
TREEFAM | TREEFAM_ID | TF316339 | |||||||
TrEMBL | UniProtAcc | Q9GYK0 | |||||||
UniProt_GCRP | UniProtAcc | Q9GYK0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Jun 2005 10:01:00 | WBPerson2970 | Name_change | CGC_name | lmp-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lmp | ||||||||
Allele (33) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (8) | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00003053 | Caenorhabditis elegans | From_analysis | Panther | |||||
Structured_description | Concise_description | lmp-2 encodes a transmembrane protein that is one of two C. elegans LAMP (lysosomal associated membrane glycoprotein) homologs. | Paper_evidence | WBPaper00030788 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 12 Jun 2008 00:00:00 | ||||||||
Automated_description | Predicted to be involved in establishment of protein localization to organelle. Predicted to be located in late endosome membrane; lysosomal membrane; and plasma membrane. Is an ortholog of human LAMP1 (lysosomal associated membrane protein 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C05D9.2 | |||||||
Corresponding_transcript | C05D9.2.1 | ||||||||
C05D9.2.2 | |||||||||
C05D9.2.3 | |||||||||
Other_sequence | CBC17005_1 | ||||||||
CJC09270_1 | |||||||||
CBC07432_1 | |||||||||
Associated_feature | WBsf647819 | ||||||||
WBsf235314 | |||||||||
Experimental_info | RNAi_result | WBRNAi00000249 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028504 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010212 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039761 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076085 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13184 | ||||||||
Expr1021936 | |||||||||
Expr1143848 | |||||||||
Expr2013236 | |||||||||
Expr2031467 | |||||||||
Drives_construct | WBCnstr00028820 | ||||||||
Construct_product | WBCnstr00028820 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (169) | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00030788 | ||||||||
WBPaper00030896 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00050406 | |||||||||
WBPaper00050648 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056693 | |||||||||
WBPaper00059755 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |