WormBase Tree Display for Gene: WBGene00015007
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WBGene00015007 | SMap | S_parent | Sequence | B0041 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ain | ||||||
Allele (108) | |||||||
Strain | WBStrain00026535 | ||||||
WBStrain00054872 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00021370 | ||||||
00021371 | |||||||
00021372 | |||||||
00021373 | |||||||
Ortholog (23) | |||||||
Structured_description | Concise_description | ain-2 encodes, by alternative splicing, three isoforms of anunfamiliar protein paralogous to AIN-1, and homologous to Brugia malayi14748.m00068, 14052.m00191, and 14963.m01790; AIN-2 protein bindsGEI-4 and GEI-16 in yeast two-hybrid experiments; AIN-2 and itsnematode homologs have weak similarity to human TNRC6A (GW182;OMIM:610739) and Drosophila GAWKY; ain-2 has no obvious function inmass RNAi assays. | Paper_evidence | WBPaper00006332 | |||
WBPaper00026707 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 15 Jul 2009 00:00:00 | ||||||
Automated_description | Involved in negative regulation of gene expression; regulation of cell fate specification; and regulation of development, heterochronic. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result (6) | ||||||
Expr_pattern | Expr7851 | ||||||
Expr10993 | |||||||
Expr13424 | |||||||
Expr1010251 | |||||||
Expr1036414 | |||||||
Expr1142893 | |||||||
Expr2009273 | |||||||
Expr2027510 | |||||||
Drives_construct | WBCnstr00004972 | ||||||
WBCnstr00017844 | |||||||
WBCnstr00029164 | |||||||
WBCnstr00039525 | |||||||
Construct_product | WBCnstr00004972 | ||||||
WBCnstr00017844 | |||||||
WBCnstr00029164 | |||||||
WBCnstr00039525 | |||||||
Regulate_expr_cluster | WBPaper00031252:AIN-2_IP_enriched | ||||||
WBPaper00035084:embryo_enriched_AIN-2_IP | |||||||
WBPaper00035084:L1_enriched_AIN-2_IP | |||||||
WBPaper00035084:L2_enriched_AIN-2_IP | |||||||
WBPaper00035084:L3_enriched_AIN-2_IP | |||||||
WBPaper00035084:L4_enriched_AIN-2_IP | |||||||
WBPaper00040985:AIN-2_asynchronous_intestine | |||||||
WBPaper00040985:AIN-2_asynchronous_muscle | |||||||
WBPaper00040985:AIN-2_L4_intestine | |||||||
WBPaper00042548:miRISC_enriched | |||||||
Antibody | WBAntibody00002712 | ||||||
Microarray_results (39) | |||||||
Expression_cluster (118) | |||||||
Interaction (50) | |||||||
Map_info | Map | I | Position | -1.02852 | Error | 0.002242 | |
Positive | Positive_clone | B0041 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (19) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |