WormBase Tree Display for Gene: WBGene00014109
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WBGene00014109 | SMap | S_parent | Sequence | ZK856 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | chpf-1 | Person_evidence | WBPerson2233 | |||
Sequence_name | ZK856.8 | ||||||
Molecular_name | ZK856.8 | ||||||
ZK856.8.1 | |||||||
CE06665 | |||||||
Other_name | CELE_ZK856.8 | Accession_evidence | NDB | BX284605 | |||
Public_name | chpf-1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | chpf | ||||||
Allele (20) | |||||||
Strain | WBStrain00003461 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Contained_in_operon | CEOP5248 | ||||||
Ortholog (40) | |||||||
Paralog | WBGene00003941 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00019108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00009260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00020192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in head; intestine; tail; and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17433) | ||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00033583 | Inferred_automatically | RNAi_primary | |||
WBRNAi00022203 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080519 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027568 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027110 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059779 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr7265 | ||||||
Expr12596 | |||||||
Expr12597 | |||||||
Expr1012295 | |||||||
Expr1036319 | |||||||
Expr1163208 | |||||||
Expr2009997 | |||||||
Expr2028238 | |||||||
Drives_construct | WBCnstr00003922 | ||||||
WBCnstr00022362 | |||||||
WBCnstr00022363 | |||||||
WBCnstr00029301 | |||||||
Construct_product | WBCnstr00029301 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (99) | |||||||
Interaction (28) | |||||||
Map_info | Positive | Positive_clone | ZK856 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | V | 2.32882 | |||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00061547 | |||||||
Method | Gene |