WormBase Tree Display for Gene: WBGene00014109
expand all nodes | collapse all nodes | view schema
WBGene00014109 | SMap | S_parent | Sequence | ZK856 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | chpf-1 | Person_evidence | WBPerson2233 | |||||
Sequence_name | ZK856.8 | ||||||||
Molecular_name | ZK856.8 | ||||||||
ZK856.8.1 | |||||||||
CE06665 | |||||||||
Other_name | CELE_ZK856.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | chpf-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 14 Apr 2015 09:52:28 | WBPerson2970 | Name_change | CGC_name | chpf-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chpf | ||||||||
Allele (20) | |||||||||
Strain | WBStrain00003461 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Contained_in_operon | CEOP5248 | ||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00003941 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00019108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000554 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009260 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020192 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in head; intestine; tail; and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17433) | ||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00033583 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022203 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080519 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027568 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027110 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059779 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr7265 | ||||||||
Expr12596 | |||||||||
Expr12597 | |||||||||
Expr1012295 | |||||||||
Expr1036319 | |||||||||
Expr1163208 | |||||||||
Expr2009997 | |||||||||
Expr2028238 | |||||||||
Drives_construct | WBCnstr00003922 | ||||||||
WBCnstr00022362 | |||||||||
WBCnstr00022363 | |||||||||
WBCnstr00029301 | |||||||||
Construct_product | WBCnstr00029301 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (99) | |||||||||
Interaction (28) | |||||||||
Map_info | Positive | Positive_clone | ZK856 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.32882 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00061547 | |||||||||
Method | Gene |