WormBase Tree Display for Gene: WBGene00012579
expand all nodes | collapse all nodes | view schema
| WBGene00012579 | SMap | S_parent | Sequence | Y38E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y38E10A.1 | |||||||
| Molecular_name | Y38E10A.1a | ||||||||
| Y38E10A.1a.1 | |||||||||
| CE53025 | |||||||||
| Y38E10A.1b | |||||||||
| CE52995 | |||||||||
| Y38E10A.1b.1 | |||||||||
| Other_name | CELE_Y38E10A.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y38E10A.1 | ||||||||
| DB_info | Database | AceView | gene | 2M860 | |||||
| WormQTL | gene | WBGene00012579 | |||||||
| WormFlux | gene | WBGene00012579 | |||||||
| NDB | locus_tag | CELE_Y38E10A.1 | |||||||
| NCBI | gene | 189652 | |||||||
| RefSeq | protein | NM_001373803.1 | |||||||
| NM_001373802.1 | |||||||||
| TrEMBL | UniProtAcc | A0A486WV89 | |||||||
| A0A486WWG6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A486WV89 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g6210 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is affected by cyc-1 and rsr-2 based on microarray and tiling array studies. Is affected by Chlorpyrifos and Diazinon based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38E10A.1a | |||||||
| Y38E10A.1b | |||||||||
| Corresponding_CDS_history | Y38E10A.1:wp270 | ||||||||
| Corresponding_transcript | Y38E10A.1a.1 | ||||||||
| Y38E10A.1b.1 | |||||||||
| Transcription_factor | WBTranscriptionFactor000339 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020272 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056009 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026426 | ||||||||
| Expr1159527 | |||||||||
| Drives_construct | WBCnstr00029900 | ||||||||
| Construct_product | WBCnstr00029900 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster | WBPaper00033065:cyc-1(RNAi)_upregulated | ||||||||
| WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray | |||||||||
| WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray | |||||||||
| WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | |||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00030985:Erwinia_carotovora_downregulated | |||||||||
| WBPaper00034661:AgNPs_downregulated | |||||||||
| WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated | |||||||||
| WBPaper00037147:heatshock_downregulated | |||||||||
| Map_info | Positive | Positive_clone | Y38E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 10.3466 | |||||||
| Reference | WBPaper00027309 | ||||||||
| Method | Gene |
