WormBase Tree Display for Gene: WBGene00012516

WBGene00012516 SMap: S_parent: Sequence: Y32B12A
  Identity: Version: 2
    Name: CGC_name: sqst-4
      Sequence_name: Y32B12A.1
      Molecular_name: Y32B12A.1
        Y32B12A.1.1
        CE19058
      Other_name: CELE_Y32B12A.1 Accession_evidence: NDB BX284605
      Public_name: sqst-4
    DB_info: Database: AceView gene 5Q957
        WormQTL gene WBGene00012516
        WormFlux gene WBGene00012516
        NDB locus_tag CELE_Y32B12A.1
        Panther gene CAEEL|WormBase=WBGene00012516|UniProtKB=Q9XXG8
          family PTHR15090
        NCBI gene 189561
        RefSeq protein NM_074772.2
        TREEFAM TREEFAM_ID TF317066
        TrEMBL UniProtAcc Q9XXG8
        UniProt_GCRP UniProtAcc Q9XXG8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Apr 2013 16:46:51 WBPerson2970 Name_change: CGC_name: sqst-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sqst
    Allele (52)
    RNASeq_FPKM (74)
    GO_annotation: 00104358
      00104359
      00104360
      00104361
      00104362
      00104363
      00104364
      00104365
      00119612
    Ortholog (18)
    Paralog: WBGene00011737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012067 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021495 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00077617 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00015552 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable K63-linked polyubiquitin modification-dependent protein binding activity and protein kinase C binding activity. Predicted to be involved in aggrephagy; endosome organization; and mitophagy. Predicted to be located in aggresome and amphisome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y32B12A.1
    Corresponding_transcript: Y32B12A.1.1
    Associated_feature: WBsf662159
  Experimental_info: RNAi_result: WBRNAi00055767 Inferred_automatically: RNAi_primary
      WBRNAi00020162 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016515
      Expr1159300
      Expr2016114
      Expr2034349
    Drives_construct: WBCnstr00029931
    Construct_product: WBCnstr00029931
    Microarray_results (17)
    Expression_cluster (20)
    Interaction (99)
  Map_info: Map: V Position: 10.1347
    Positive: Positive_clone: Y32B12A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00056693
    WBPaper00060613
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene