WormBase Tree Display for Gene: WBGene00012505
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WBGene00012505 | SMap | S_parent | Sequence | Y26D4A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pals-13 | Person_evidence | WBPerson260 | |||
Sequence_name | Y26D4A.8 | ||||||
Molecular_name | Y26D4A.8 | ||||||
WP:CE21488 | |||||||
CE21488 | |||||||
Y26D4A.8.1 | |||||||
Other_name | CELE_Y26D4A.8 | Accession_evidence | NDB | BX284601 | |||
Public_name | pals-13 | ||||||
DB_info | Database | AceView | gene | 1N672 | |||
WormQTL | gene | WBGene00012505 | |||||
WormFlux | gene | WBGene00012505 | |||||
NDB | locus_tag | CELE_Y26D4A.8 | |||||
NCBI | gene | 189548 | |||||
RefSeq | mRNA | NM_060889.1 | |||||
protein | NP_493290.1 | ||||||
NM_060889.2 | |||||||
TREEFAM | TREEFAM_ID | TF322118 | |||||
UniProt | UniProtAcc | Q9U2P6 | |||||
TrEMBL | UniProtAcc | Q9U2P6 | |||||
UniProt_GCRP | UniProtAcc | Q9U2P6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele (98) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00271585 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||
CSP26.g4056 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||
CSP40.g862 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||
Cnig_chr_V.g18706 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||
GCK72_018441 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
chrI_pilon.g2647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00007657 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00007659 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00007660 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00007131 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007132 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007134 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and csr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including allantoin; metformin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y26D4A.8 | |||||
Corresponding_transcript | Y26D4A.8.1 | ||||||
Associated_feature | WBsf985773 | ||||||
Experimental_info | RNAi_result | WBRNAi00002980 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055750 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004571 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025809 | ||||||
Expr1159273 | |||||||
Expr2032922 | |||||||
Drives_construct | WBCnstr00029937 | ||||||
Construct_product | WBCnstr00029937 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (43) | |||||||
Map_info | Map | I | Position | 17.2163 | |||
Positive | Positive_clone | Y26D4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |