WormBase Tree Display for Gene: WBGene00012505
expand all nodes | collapse all nodes | view schema
WBGene00012505 | SMap | S_parent | Sequence | Y26D4A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pals | |||||
Allele (98) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00271585 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||
CSP26.g4056 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | |||
CSP40.g862 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | |||
Cnig_chr_V.g18706 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | |||
GCK72_018441 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||
chrI_pilon.g2647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog | WBGene00007657 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WormBase-Compara | ||||||
WBGene00007659 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | ||||||
WBGene00007660 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | ||||||
WBGene00007131 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00007132 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00007134 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and csr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including allantoin; metformin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y26D4A.8 | ||||
Corresponding_transcript | Y26D4A.8.1 | |||||
Associated_feature | WBsf985773 | |||||
Experimental_info | RNAi_result | WBRNAi00002980 | Inferred_automatically | RNAi_primary | ||
WBRNAi00055750 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00004571 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1025809 | |||||
Expr1159273 | ||||||
Expr2032922 | ||||||
Drives_construct | WBCnstr00029937 | |||||
Construct_product | WBCnstr00029937 | |||||
Microarray_results (14) | ||||||
Expression_cluster (43) | ||||||
Map_info | Map | I | Position | 17.2163 | ||
Positive | Positive_clone | Y26D4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |