WormBase Tree Display for Gene: WBGene00011869
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WBGene00011869 | Evidence | Paper_evidence | WBPaper00005976 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T20G5 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | dod-6 | Person_evidence | WBPerson1157 | |||||
Sequence_name | T20G5.7 | ||||||||
Molecular_name | T20G5.7 | ||||||||
T20G5.7.1 | |||||||||
CE00587 | |||||||||
Other_name | CELE_T20G5.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | dod-6 | ||||||||
DB_info | Database | AceView | gene | 3L287 | |||||
WormQTL | gene | WBGene00011869 | |||||||
WormFlux | gene | WBGene00011869 | |||||||
NDB | locus_tag | CELE_T20G5.7 | |||||||
NCBI | gene | 176433 | |||||||
RefSeq | protein | NM_066856.8 | |||||||
TrEMBL | UniProtAcc | Q22613 | |||||||
UniProt_GCRP | UniProtAcc | Q22613 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 Aug 2004 11:03:28 | WBPerson1971 | Name_change | CGC_name | dod-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dod | ||||||||
Allele (13) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00075795 | ||||||||
Ortholog | WBGene00031323 | Caenorhabditis briggsae | From_analysis (2) | ||||||
WBGene00142088 | Caenorhabditis brenneri | From_analysis (2) | |||||||
WBGene00085206 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00085211 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00193272 | Caenorhabditis brenneri | From_analysis (2) | |||||||
WBGene00087292 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
CSP31.g20309 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
Sp34_30209210 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
Paralog | WBGene00011870 | Caenorhabditis elegans | From_analysis (2) | ||||||
Structured_description | Automated_description | Involved in pharyngeal gland morphogenesis. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T20G5.7 | |||||||
Corresponding_transcript | T20G5.7.1 | ||||||||
Other_sequence | FD517664.1 | ||||||||
CRC06793_1 | |||||||||
FD514181.1 | |||||||||
CBC14050_1 | |||||||||
CBC03828_1 | |||||||||
CR04490 | |||||||||
CSC01566_1 | |||||||||
FD515453.1 | |||||||||
Associated_feature | WBsf019176 | ||||||||
WBsf645545 | |||||||||
WBsf645546 | |||||||||
WBsf993931 | |||||||||
WBsf1015747 | |||||||||
WBsf225679 | |||||||||
WBsf225680 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035724 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053666 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006370 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063166 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018931 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063165 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011253 | ||||||||
Expr1035230 | |||||||||
Expr1157221 | |||||||||
Expr2011022 | |||||||||
Expr2029259 | |||||||||
Drives_construct | WBCnstr00030322 | ||||||||
Construct_product | WBCnstr00030322 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (269) | |||||||||
Interaction | WBInteraction000030911 | ||||||||
WBInteraction000349708 | |||||||||
WBInteraction000385304 | |||||||||
WBInteraction000449381 | |||||||||
WBInteraction000519436 | |||||||||
WBProcess | WBbiopr:00000039 | ||||||||
Map_info | Map | III | Position | 2.00823 | Error | 0.001644 | |||
Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005976 | ||||||||
WBPaper00031482 | |||||||||
WBPaper00032277 | |||||||||
WBPaper00042367 | |||||||||
WBPaper00044217 | |||||||||
WBPaper00051227 | |||||||||
WBPaper00061133 | |||||||||
WBPaper00062392 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |