WormBase Tree Display for Gene: WBGene00009082
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| WBGene00009082 | SMap | S_parent | Sequence | F23B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dlat-1 | Person_evidence | WBPerson1983 | |||||
| WBPerson261 | |||||||||
| Sequence_name | F23B12.5 | ||||||||
| Molecular_name | F23B12.5 | ||||||||
| F23B12.5.1 | |||||||||
| CE09597 | |||||||||
| Other_name | CELE_F23B12.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dlat-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | dlat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dlat | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00002401 | ||||||||
| WBStrain00001598 | |||||||||
| WBStrain00051672 | |||||||||
| WBStrain00051677 | |||||||||
| WBStrain00055610 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00007824 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00014054 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020950 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | dlat-1 is orthologous to the human gene dihydrolipoyllysine acetyltransferase component of the pyruvate dehydrogenase complex, mitochondrial; dlat-1 is involved in embryo development and reproduction; dlat-1 is predicted to have dihydrolipoyllysine-residue acetyltransferase activity, based on protein domain information; dlat-1 is expressed in the pharynx, anal depressor muscle, nervous system, head, tail, reproductive system, intestine, and the body wall musculature. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006395 | |||||||||
| WBPaper00006525 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00029359 | |||||||||
| WBPaper00045521 | |||||||||
| WBPaper00045688 | |||||||||
| WBPaper00045689 | |||||||||
| WBPaper00049100 | |||||||||
| Person_evidence | WBPerson151 | ||||||||
| Accession_evidence | EnsEMBL | ENSG00000150768 | |||||||
| INTERPRO | IPR006257 | ||||||||
| IPR001078 | |||||||||
| IPR004167 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 01 Jun 2017 00:00:00 | ||||||||
| Automated_description | Predicted to enable dihydrolipoyllysine-residue acetyltransferase activity. Predicted to be involved in acetyl-CoA biosynthetic process from pyruvate. Predicted to be located in mitochondrial matrix. Predicted to be part of mitochondrial pyruvate dehydrogenase complex. Expressed in several structures, including head and tail. Human ortholog(s) of this gene implicated in pyruvate decarboxylase deficiency. Is an ortholog of human DLAT (dihydrolipoamide S-acetyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3649 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2896) | ||||
| Molecular_info | Corresponding_CDS | F23B12.5 | |||||||
| Corresponding_transcript | F23B12.5.1 | ||||||||
| Other_sequence (129) | |||||||||
| Associated_feature | WBsf653387 | ||||||||
| WBsf234949 | |||||||||
| WBsf234950 | |||||||||
| WBsf234951 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00106959 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00071594 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045381 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033341 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096985 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096925 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025197 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108040 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008687 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram184 | ||||||||
| Chronogram1100 | |||||||||
| Expr5834 | |||||||||
| Expr5835 | |||||||||
| Expr16128 | |||||||||
| Expr1023106 | |||||||||
| Expr1033956 | |||||||||
| Expr1149304 | |||||||||
| Expr2010939 | |||||||||
| Expr2029178 | |||||||||
| Drives_construct | WBCnstr00002437 | ||||||||
| WBCnstr00004343 | |||||||||
| WBCnstr00032479 | |||||||||
| Construct_product | WBCnstr00032479 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (247) | |||||||||
| Map_info | Map | V | Position | 6.3438 | |||||
| Positive | Positive_clone | F23B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027145 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057849 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
