WormBase Tree Display for Gene: WBGene00014054
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WBGene00014054 | SMap | S_parent | Sequence | ZK669 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dbt-1 | Paper_evidence | WBPaper00048986 | |||||
Person_evidence | WBPerson237 | ||||||||
Sequence_name | ZK669.4 | ||||||||
Molecular_name | ZK669.4 | ||||||||
ZK669.4.1 | |||||||||
CE01115 | |||||||||
Other_name | CELE_ZK669.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | dbt-1 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2016 15:29:00 | WBPerson2970 | Name_change | CGC_name | dbt-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dbt | ||||||||
Allele (36) | |||||||||
Strain | WBStrain00037245 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (27) | |||||||||
Contained_in_operon | CEOP2705 | ||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00007824 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00009082 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020950 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | ZK669.4 is orthologous to the human gene DIHYDROLIPOAMIDE BRANCHED CHAIN TRANSACYLASE (E2 COMPONENT OF BRANCHED CHAIN KETO ACID DEHYDROGENASE COMPLEX; (DBT), which when mutated leads to maple syrup urine disease, type II (OMIM:248610); the ZK669.4 protein is predicted to be mitochondrial with 68% accuracy. | Paper_evidence | WBPaper00004424 | |||||
WBPaper00004637 | |||||||||
Curator_confirmed | WBPerson1823 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable acetyltransferase activity and lipoic acid binding activity. Involved in positive regulation of fatty acid biosynthetic process and positive regulation of multicellular organismal process. Located in cilium; cytosol; and neuron projection. Expressed in several structures, including body wall musculature; head neurons; hypodermis; and intestine. Human ortholog(s) of this gene implicated in maple syrup urine disease. Is an ortholog of human DBT (dihydrolipoamide branched chain transacylase E2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9269 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2698) | ||||
Molecular_info | Corresponding_CDS | ZK669.4 | |||||||
Corresponding_transcript | ZK669.4.1 | ||||||||
Other_sequence (77) | |||||||||
Associated_feature | WBsf650280 | ||||||||
WBsf665755 | |||||||||
WBsf665756 | |||||||||
WBsf988613 | |||||||||
WBsf223418 | |||||||||
Experimental_info | RNAi_result | WBRNAi00112091 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112089 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038407 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112092 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00106981 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00112090 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059639 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr12632 | ||||||||
Expr12633 | |||||||||
Expr1010248 | |||||||||
Expr1036289 | |||||||||
Expr1163048 | |||||||||
Expr2010800 | |||||||||
Expr2029037 | |||||||||
Drives_construct | WBCnstr00022340 | ||||||||
WBCnstr00022341 | |||||||||
WBCnstr00029347 | |||||||||
Construct_product | WBCnstr00022341 | ||||||||
WBCnstr00029347 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (156) | |||||||||
Interaction (124) | |||||||||
Map_info | Map | II | Position | 0.618452 | |||||
Positive | Positive_clone | ZK669 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00042204 | |||||||||
WBPaper00047693 | |||||||||
WBPaper00048986 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056557 | |||||||||
WBPaper00058758 | |||||||||
WBPaper00060459 | |||||||||
WBPaper00065140 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |