WormBase Tree Display for Gene: WBGene00009059
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WBGene00009059 | SMap | S_parent | Sequence | F22E12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | chw-1 | |||||
Sequence_name | F22E12.2 | ||||||
Molecular_name | F22E12.2 | ||||||
F22E12.2.1 | |||||||
CE05696 | |||||||
Other_name | CELE_F22E12.2 | Accession_evidence | NDB | BX284605 | |||
Public_name | chw-1 | ||||||
DB_info | Database | AceView | gene | 5K943 | |||
WormQTL | gene | WBGene00009059 | |||||
WormFlux | gene | WBGene00009059 | |||||
NDB | locus_tag | CELE_F22E12.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009059|UniProtKB=Q19739 | |||||
family | PTHR24072 | ||||||
NCBI | gene | 184848 | |||||
RefSeq | protein | NM_073285.2 | |||||
TREEFAM | TREEFAM_ID | TF321839 | |||||
TrEMBL | UniProtAcc | Q19739 | |||||
UniProt_GCRP | UniProtAcc | Q19739 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | chw | ||||||
Allele (28) | |||||||
Strain | WBStrain00031576 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (20) | |||||||
Ortholog (38) | |||||||
Paralog | WBGene00000390 | Caenorhabditis elegans | From_analysis (2) | ||||
WBGene00000424 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00003239 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00004287 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00004357 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00019544 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00022177 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012532 | Caenorhabditis elegans | From_analysis (2) | |||||
Structured_description | Automated_description | Predicted to enable GTP binding activity; GTPase activity; and protein kinase binding activity. Involved in establishment or maintenance of cell polarity and vulval development. Predicted to be located in plasma membrane. Expressed in several structures, including P3.pa; P3.pp; P4.pa; P4.pp; and P8.pa. Is an ortholog of human RHOU (ras homolog family member U). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F22E12.2 | |||||
Corresponding_transcript | F22E12.2.1 | ||||||
Other_sequence | Oden_isotig21620 | ||||||
CR01151 | |||||||
Dviv_isotig24876 | |||||||
Oden_isotig24504 | |||||||
CRC02711_1 | |||||||
Associated_feature | WBsf661629 | ||||||
Experimental_info | RNAi_result | WBRNAi00013757 | Inferred_automatically | RNAi_primary | |||
WBRNAi00108141 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031278 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094825 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045328 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00107627 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108142 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108140 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr12413 | ||||||
Expr1020601 | |||||||
Expr1033950 | |||||||
Expr1149251 | |||||||
Expr2010008 | |||||||
Expr2028249 | |||||||
Drives_construct | WBCnstr00020742 | ||||||
WBCnstr00032492 | |||||||
Construct_product | WBCnstr00032492 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (119) | |||||||
Interaction | WBInteraction000031287 | ||||||
WBInteraction000032007 | |||||||
WBInteraction000343952 | |||||||
WBInteraction000441076 | |||||||
WBInteraction000534753 | |||||||
WBInteraction000534754 | |||||||
WBInteraction000563423 | |||||||
Map_info | Map | V | Position | 2.56276 | Error | 0.001499 | |
Positive | Positive_clone | F22E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4678 | |||||
5046 | |||||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |