WormBase Tree Display for Gene: WBGene00008307
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| WBGene00008307 | SMap | S_parent | Sequence | C54E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ncs-5 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C54E10.2 | ||||||||
| Molecular_name | C54E10.2a | ||||||||
| C54E10.2a.1 | |||||||||
| CE34776 | |||||||||
| C54E10.2b | |||||||||
| CE44784 | |||||||||
| C54E10.2b.1 | |||||||||
| C54E10.2c | |||||||||
| Other_name | CELE_C54E10.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ncs-5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | ncs-5 | ||||
| 3 | 13 Jan 2017 12:19:57 | WBPerson4025 | Event | Acquires_merge | WBGene00195059 | ||||
| Acquires_merge | WBGene00195059 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncs | ||||||||
| Allele (456) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007683 | ||||||||
| 00116246 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00003563 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003564 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008998 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015867 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021116 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007710 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Expressed in body wall musculature and head neurons. Is an ortholog of human KCNIP1 (potassium voltage-gated channel interacting protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54E10.2a | |||||||
| C54E10.2b | |||||||||
| Corresponding_CDS_history | C54E10.2:wp106 | ||||||||
| Corresponding_transcript | C54E10.2c | ||||||||
| C54E10.2a.1 | |||||||||
| C54E10.2b.1 | |||||||||
| Other_sequence (38) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012393 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043148 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030141 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007401 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12200 | ||||||||
| Expr1011917 | |||||||||
| Expr1147123 | |||||||||
| Expr1147129 | |||||||||
| Expr2013914 | |||||||||
| Expr2032154 | |||||||||
| Drives_construct | WBCnstr00020400 | ||||||||
| Construct_product | WBCnstr00020400 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction | WBInteraction000029955 | ||||||||
| WBInteraction000032040 | |||||||||
| WBInteraction000307773 | |||||||||
| WBInteraction000404266 | |||||||||
| WBInteraction000429365 | |||||||||
| WBInteraction000456147 | |||||||||
| WBInteraction000540739 | |||||||||
| Map_info | Map | V | Position | 18.0535 | |||||
| Positive | Positive_clone | C54E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00046422 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
