WormBase Tree Display for Gene: WBGene00003564
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| WBGene00003564 | SMap | S_parent | Sequence | F10G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ncs-2 | |||||||
| Sequence_name | F10G8.5 | ||||||||
| Molecular_name | F10G8.5 | ||||||||
| F10G8.5.1 | |||||||||
| CE09340 | |||||||||
| Other_name | CELE_F10G8.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ncs-2 | ||||||||
| DB_info | Database | AceView | gene | 1K610 | |||||
| WormQTL | gene | WBGene00003564 | |||||||
| WormFlux | gene | WBGene00003564 | |||||||
| NDB | locus_tag | CELE_F10G8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003564|UniProtKB=P36609 | |||||||
| family | PTHR23055 | ||||||||
| NCBI | gene | 172866 | |||||||
| RefSeq | protein | NM_001381187.1 | |||||||
| SwissProt | UniProtAcc | P36609 | |||||||
| UniProt_GCRP | UniProtAcc | P36609 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncs | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00050660 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00044971 | ||||||||
| 00044972 | |||||||||
| 00111141 | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00003563 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00008998 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021116 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008307 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00015867 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003565 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007710 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Expressed in GABAergic neurons; cholinergic neurons; motor neurons; nervous system; and ventral nerve cord. Is an ortholog of human RCVRN (recoverin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10G8.5 | |||||||
| Corresponding_transcript | F10G8.5.1 | ||||||||
| Other_sequence (79) | |||||||||
| Associated_feature | WBsf664820 | ||||||||
| WBsf976547 | |||||||||
| WBsf976548 | |||||||||
| WBsf976549 | |||||||||
| WBsf976550 | |||||||||
| WBsf220184 | |||||||||
| WBsf220185 | |||||||||
| WBsf220186 | |||||||||
| WBsf220187 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00044327 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003359 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13288 | ||||||||
| Expr15531 | |||||||||
| Expr15848 | |||||||||
| Expr1028623 | |||||||||
| Expr1031623 | |||||||||
| Expr1148264 | |||||||||
| Expr2013911 | |||||||||
| Expr2032151 | |||||||||
| Drives_construct | WBCnstr00036040 | ||||||||
| WBCnstr00042260 | |||||||||
| Construct_product | WBCnstr00036040 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | I | Position | 4.56168 | Error | 0.009448 | |||
| Positive | Positive_clone | AC2 | Person_evidence | WBPerson1321 | |||||
| Author_evidence | de Castro E | ||||||||
| C09D5 | Person_evidence | WBPerson1321 | |||||||
| Author_evidence | de Castro E | ||||||||
| F10G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| K09B7 | Person_evidence | WBPerson1321 | |||||||
| Author_evidence | de Castro E | ||||||||
| Mapping_data | Multi_point | 5251 | |||||||
| 5541 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004225 | ||||||||
| WBPaper00015440 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051225 | |||||||||
| WBPaper00052830 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061878 | |||||||||
| WBPaper00063819 | |||||||||
| Remark | [de Castro E, Nef P ] No mutants known. ncs for Neuronal Calcium Sensor. Ce-NCS-2: cDNA: genbank name CELNCS2, accession L33681; Protein: Swiss Prot name NCS2_CAEEL, accession p36609 | ||||||||
| I, +4.45 | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
