WormBase Tree Display for Gene: WBGene00003564

WBGene00003564 SMap: S_parent: Sequence: F10G8
  Identity: Version: 1
    Name: CGC_name: ncs-2
      Sequence_name: F10G8.5
      Molecular_name: F10G8.5
        F10G8.5.1
        CE09340
      Other_name: CELE_F10G8.5 Accession_evidence: NDB BX284601
      Public_name: ncs-2
    DB_info: Database: AceView gene 1K610
        WormQTL gene WBGene00003564
        WormFlux gene WBGene00003564
        NDB locus_tag CELE_F10G8.5
        Panther gene CAEEL|WormBase=WBGene00003564|UniProtKB=P36609
          family PTHR23055
        NCBI gene 172866
        RefSeq protein NM_001381187.1
        SwissProt UniProtAcc P36609
        UniProt_GCRP UniProtAcc P36609
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ncs
    Allele (22)
    Strain: WBStrain00050660
    RNASeq_FPKM (74)
    GO_annotation: 00044971
      00044972
      00111141
    Ortholog: WBGene00026571 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00079906 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00146724 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128580 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00106609 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00160949 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00223548 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10274 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1340 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14155 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7809 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13540 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26828 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8166 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9524 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16312 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20221 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00550.g12126 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ncs-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10848 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01606.g22028 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17313 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000657 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06098 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9758 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10058310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1957 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237359 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259930 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291250 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036926 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-011128-5 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-011128-6 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-030131-7590 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-030829-1 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-040426-1577 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-040426-1683 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-041001-211 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-050120-1 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-040724-231 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-080225-39 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-050419-38 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-060503-307 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-050913-106 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-040426-1661 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-120815-1 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      ZFIN:ZDB-GENE-091204-414 Danio rerio From_analysis: EnsEMBL-Compara
            Panther
      HGNC:9937 Homo sapiens From_analysis: EnsEMBL-Compara
            OMA
            Panther
      MGI:97883 Mus musculus From_analysis: EnsEMBL-Compara
            OMA
            Panther
      RGD:620258 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OMA
            Panther
    Paralog: WBGene00003563 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008998 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021116 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008307 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015867 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003565 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007710 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Expressed in GABAergic neurons; cholinergic neurons; motor neurons; nervous system; and ventral nerve cord. Is an ortholog of human RCVRN (recoverin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F10G8.5
    Corresponding_transcript: F10G8.5.1
    Other_sequence (79)
    Associated_feature: WBsf664820
      WBsf976547
      WBsf976548
      WBsf976549
      WBsf976550
      WBsf220184
      WBsf220185
      WBsf220186
      WBsf220187
  Experimental_info: RNAi_result: WBRNAi00044327 Inferred_automatically: RNAi_primary
      WBRNAi00003359 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13288
      Expr15531
      Expr15848
      Expr1028623
      Expr1031623
      Expr1148264
      Expr2013911
      Expr2032151
    Drives_construct: WBCnstr00036040
      WBCnstr00042260
    Construct_product: WBCnstr00036040
    Microarray_results (24)
    Expression_cluster (179)
    Interaction (17)
  Map_info: Map: I Position: 4.56168 Error: 0.009448
    Positive: Positive_clone: AC2 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
        C09D5 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
        F10G8 Inferred_automatically: From sequence, transcript, pseudogene data
        K09B7 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
    Mapping_data: Multi_point: 5251
        5541
    Pseudo_map_position
  Reference: WBPaper00004225
    WBPaper00015440
    WBPaper00038491
    WBPaper00051225
    WBPaper00052830
    WBPaper00055090
    WBPaper00061878
    WBPaper00063819
  Remark: [de Castro E, Nef P ] No mutants known. ncs for Neuronal Calcium Sensor. Ce-NCS-2: cDNA: genbank name CELNCS2, accession L33681; Protein: Swiss Prot name NCS2_CAEEL, accession p36609
    I, +4.45
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene