WormBase Tree Display for Gene: WBGene00008194
expand all nodes | collapse all nodes | view schema
WBGene00008194 | SMap | S_parent | Sequence | C49C3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C49C3.4 | |||||||
Molecular_name | C49C3.4a | ||||||||
C49C3.4a.1 | |||||||||
CE19743 | |||||||||
C49C3.4b | |||||||||
CE48513 | |||||||||
C49C3.4c | |||||||||
CE50538 | |||||||||
C49C3.4b.1 | |||||||||
C49C3.4c.1 | |||||||||
Other_name | CELE_C49C3.4 | Accession_evidence | NDB | BX284604 | |||||
Public_name | C49C3.4 | ||||||||
DB_info | Database | AceView | gene | 4S271 | |||||
WormQTL | gene | WBGene00008194 | |||||||
WormFlux | gene | WBGene00008194 | |||||||
NDB | locus_tag | CELE_C49C3.4 | |||||||
NCBI | gene | 178513 | |||||||
RefSeq | protein | NM_001313021.3 | |||||||
NM_001380571.1 | |||||||||
NM_070679.6 | |||||||||
TrEMBL | UniProtAcc | A0A0K3ARI2 | |||||||
U4PBX8 | |||||||||
Q9XUF9 | |||||||||
UniProt_GCRP | UniProtAcc | Q9XUF9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (344) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (17) | |||||||||
Paralog | WBGene00012134 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00000792 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013118 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018547 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018607 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in AFD; AINL; AINR; head mesodermal cell; and intestine based on SAGE; tiling array; RNA-seq; single-cell RNA-seq; and proteomic studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on proteomic; RNA-seq; and microarray studies. Is affected by sixteen chemicals including mianserin; nicotine; and Zidovudine based on RNA-seq; proteomic; and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C49C3.4a | |||||||
C49C3.4b | |||||||||
C49C3.4c | |||||||||
Corresponding_transcript | C49C3.4a.1 | ||||||||
C49C3.4b.1 | |||||||||
C49C3.4c.1 | |||||||||
Other_sequence (17) | |||||||||
Associated_feature | WBsf646608 | ||||||||
WBsf999023 | |||||||||
WBsf999024 | |||||||||
WBsf1018979 | |||||||||
WBsf229627 | |||||||||
Experimental_info | RNAi_result | WBRNAi00042782 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012125 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028576 | ||||||||
Expr1033558 | |||||||||
Expr1146766 | |||||||||
Expr2001765 | |||||||||
Expr2019993 | |||||||||
Drives_construct | WBCnstr00033168 | ||||||||
Construct_product | WBCnstr00033168 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (193) | |||||||||
Interaction (17) | |||||||||
Map_info | Positive | Positive_clone | C49C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 16.485 | |||||||
Reference | WBPaper00041771 | ||||||||
WBPaper00065331 | |||||||||
Method | Gene |