WormBase Tree Display for Gene: WBGene00007175
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| WBGene00007175 | SMap | S_parent | Sequence | B0395 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0395.3 | |||||||
| Molecular_name | B0395.3 | ||||||||
| B0395.3.1 | |||||||||
| CE02944 | |||||||||
| B0395.3.2 | |||||||||
| B0395.3.3 | |||||||||
| Other_name | CELE_B0395.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | B0395.3 | ||||||||
| DB_info | Database | AceView | gene | XQ650 | |||||
| WormQTL | gene | WBGene00007175 | |||||||
| WormFlux | gene | WBGene00007175 | |||||||
| NDB | locus_tag | CELE_B0395.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007175|UniProtKB=Q17499 | |||||||
| family | PTHR22589 | ||||||||
| NCBI | gene | 181682 | |||||||
| RefSeq | protein | NM_078223.8 | |||||||
| TrEMBL | UniProtAcc | Q17499 | |||||||
| UniProt_GCRP | UniProtAcc | Q17499 | |||||||
| OMIM | gene | 600184 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (93) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058298 | ||||||||
| 00058299 | |||||||||
| 00058300 | |||||||||
| 00058301 | |||||||||
| 00058302 | |||||||||
| 00115391 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00000481 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00021002 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020911 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008629 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021703 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019644 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012907 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009622 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011850 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011122 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | B0395.3 is orthologous to the human gene CHOLINE ACETYLTRANSFERASE ISOFORM R (CHAT; OMIM:118490), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable carnitine O-acetyltransferase activity. Predicted to be involved in carnitine metabolic process, CoA-linked. Predicted to be located in peroxisome. Human ortholog(s) of this gene implicated in neurodegeneration with brain iron accumulation. Is an ortholog of human CRAT (carnitine O-acetyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110734 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2342) | ||||
| Molecular_info | Corresponding_CDS | B0395.3 | |||||||
| Corresponding_transcript | B0395.3.1 | ||||||||
| B0395.3.2 | |||||||||
| B0395.3.3 | |||||||||
| Other_sequence (81) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039021 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00028123 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039020 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019606 | ||||||||
| Expr1033088 | |||||||||
| Expr1143182 | |||||||||
| Expr2000173 | |||||||||
| Expr2018392 | |||||||||
| Drives_construct | WBCnstr00033945 | ||||||||
| Construct_product | WBCnstr00033945 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (136) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Positive | Positive_clone | B0395 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 23.6871 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00054451 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
