WormBase Tree Display for Gene: WBGene00006483
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| WBGene00006483 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | dgk-4 | Person_evidence | WBPerson4055 | |||||
| WBPerson453 | |||||||||
| Sequence_name | F42A9.1 | ||||||||
| Molecular_name | F42A9.1a | ||||||||
| F42A9.1a.1 | |||||||||
| CE43768 | |||||||||
| F42A9.1b | |||||||||
| CE43788 | |||||||||
| F42A9.1b.1 | |||||||||
| Other_name | tag-137 | Person_evidence | WBPerson201 | ||||||
| CELE_F42A9.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | dgk-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 28 May 2004 14:16:25 | WBPerson1971 | Event | Acquires_merge | WBGene00018331 | ||||
| 3 | 01 Aug 2007 11:01:12 | WBPerson2970 | Name_change | CGC_name | dgk-4 | ||||
| Other_name | tag-137 | ||||||||
| Acquires_merge | WBGene00018331 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dgk | ||||||||
| Allele (172) | |||||||||
| Strain | WBStrain00031778 | ||||||||
| WBStrain00035811 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP4616 | ||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00000958 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000959 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000960 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019428 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dgk-4 encodes a diacylglycerol kinase (DGK) that is most closely related to the mammalian DGK subfamily that includes DGKH and DGKD; in situ hybridization studies have detected dgk-4 mRNA in the gonad, and large-scale expression studies have reported expression in a wide range of tissues including hypodermis, muscle, neurons, and the pharynx. | Paper_evidence | WBPaper00027758 | |||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 04 Nov 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP-dependent diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Expressed in gonad; head; and tail. Is an ortholog of human DGKD (diacylglycerol kinase delta) and DGKH (diacylglycerol kinase eta). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42A9.1a | |||||||
| F42A9.1b | |||||||||
| Corresponding_CDS_history | F42A9.1a:wp203 | ||||||||
| F42A9.1b:wp203 | |||||||||
| Corresponding_transcript | F42A9.1a.1 | ||||||||
| F42A9.1b.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001004 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014813 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047073 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047074 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1103 | ||||||||
| Expr4014 | |||||||||
| Expr6038 | |||||||||
| Expr6039 | |||||||||
| Expr1021045 | |||||||||
| Expr1032650 | |||||||||
| Expr1150937 | |||||||||
| Expr2010866 | |||||||||
| Expr2029104 | |||||||||
| Drives_construct | WBCnstr00002800 | ||||||||
| WBCnstr00004422 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction | WBInteraction000173644 | ||||||||
| WBInteraction000377519 | |||||||||
| WBInteraction000426240 | |||||||||
| WBInteraction000451026 | |||||||||
| WBInteraction000582141 | |||||||||
| Map_info | Map | IV | Position | 3.92157 | Error | 0.001711 | |||
| Positive | Positive_clone | F42A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
