WormBase Tree Display for Gene: WBGene00003575
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| WBGene00003575 | Evidence | Author_evidence | Schwartz EM | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y97E10B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ncx-10 | |||||||
| Sequence_name | Y97E10B.7 | ||||||||
| Molecular_name | Y97E10B.7a | ||||||||
| Y97E10B.7a.1 | |||||||||
| CE26327 | |||||||||
| Y97E10B.7b | |||||||||
| CE44502 | |||||||||
| Y97E10B.7b.1 | |||||||||
| Other_name | Y97E10B.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y97E10B.f | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y97E10B.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | ncx-10 | ||||||||
| DB_info | Database | AceView | gene | 5I408 | |||||
| WormQTL | gene | WBGene00003575 | |||||||
| WormFlux | gene | WBGene00003575 | |||||||
| NDB | locus_tag | CELE_Y97E10B.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003575|UniProtKB=Q965R5 | |||||||
| family | PTHR12266 | ||||||||
| NCBI | gene | 190821 | |||||||
| RefSeq | protein | NM_001269165.1 | |||||||
| NM_001373058.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF323444 | |||||||
| TrEMBL | UniProtAcc | Q965R5 | |||||||
| D9P2J5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q965R5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ncx | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00003571 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003572 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003573 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003574 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | Y97E10B.7a | |||||||
| Y97E10B.7b | |||||||||
| Corresponding_transcript | Y97E10B.7a.1 | ||||||||
| Y97E10B.7b.1 | |||||||||
| Associated_feature | WBsf234004 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058691 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021541 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021542 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11164 | ||||||||
| Expr1028309 | |||||||||
| Expr1162111 | |||||||||
| Expr2013917 | |||||||||
| Expr2032157 | |||||||||
| Drives_construct | WBCnstr00018024 | ||||||||
| WBCnstr00036030 | |||||||||
| Construct_product | WBCnstr00036030 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (65) | |||||||||
| Interaction | WBInteraction000301747 | ||||||||
| WBInteraction000418232 | |||||||||
| WBInteraction000456158 | |||||||||
| WBInteraction000467553 | |||||||||
| Map_info | Map | V | Position | 0.956731 | Error | 0.001792 | |||
| Positive | Positive_clone | Y97E10B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062223 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
