WormBase Tree Display for Gene: WBGene00003538
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WBGene00003538 | Evidence | Author_evidence | Moehrlen F | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K03B8 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | nas-19 | Person_evidence | WBPerson1103 | |||||
Sequence_name | K03B8.5 | ||||||||
Molecular_name | K03B8.5 | ||||||||
K03B8.5.1 | |||||||||
CE47588 | |||||||||
Other_name | CELE_K03B8.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nas-19 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nas | ||||||||
Allele (23) | |||||||||
Strain | WBStrain00002605 | ||||||||
WBStrain00032955 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (38) | |||||||||
Paralog (48) | |||||||||
Structured_description | Concise_description | nas-19 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-19::GFP promoter fusion is expressed in the pharynx, intestine, vulva, and reproductive system. | Paper_evidence | WBPaper00006254 | |||||
WBPaper00006525 | |||||||||
WBPaper00031006 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in marginal cell; pharyngeal muscle cell; rectal gland cell; and spermatheca. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K03B8.5 | |||||||
Corresponding_CDS_history | K03B8.5:wp231 | ||||||||
Corresponding_transcript | K03B8.5.1 | ||||||||
Associated_feature | WBsf653111 | ||||||||
WBsf653112 | |||||||||
WBsf717256 | |||||||||
WBsf1001340 | |||||||||
Experimental_info | RNAi_result | WBRNAi00016522 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049800 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089110 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6312 | ||||||||
Expr8918 | |||||||||
Expr1153520 | |||||||||
Expr2013868 | |||||||||
Expr2032107 | |||||||||
Drives_construct | WBCnstr00003163 | ||||||||
WBCnstr00013612 | |||||||||
WBCnstr00036059 | |||||||||
Construct_product | WBCnstr00013612 | ||||||||
WBCnstr00036059 | |||||||||
Microarray_results (13) | |||||||||
Expression_cluster (63) | |||||||||
Interaction (32) | |||||||||
Map_info | Map | V | Position | 3.08236 | Error | 0.000274 | |||
Positive | Positive_clone | K03B8 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00006254 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |