WormBase Tree Display for Gene: WBGene00002254
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WBGene00002254 | SMap | S_parent | Sequence | F40F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lbp-2 | Person_evidence | WBPerson492 | |||||
Sequence_name | F40F4.2 | ||||||||
Molecular_name | F40F4.2 | ||||||||
F40F4.2.1 | |||||||||
CE04532 | |||||||||
F40F4.2.2 | |||||||||
Other_name | CELE_F40F4.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lbp-2 | ||||||||
DB_info | Database | AceView | gene | XD881 | |||||
WormQTL | gene | WBGene00002254 | |||||||
WormFlux | gene | WBGene00002254 | |||||||
NDB | locus_tag | CELE_F40F4.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002254|UniProtKB=Q20224 | |||||||
family | PTHR22725 | ||||||||
NCBI | gene | 180617 | |||||||
RefSeq | protein | NM_076157.10 | |||||||
SwissProt | UniProtAcc | Q20224 | |||||||
UniProt_GCRP | UniProtAcc | Q20224 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lbp | ||||||||
Allele (11) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00067530 | ||||||||
00067531 | |||||||||
00067532 | |||||||||
00110319 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00002253 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002259 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002260 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021486 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002256 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00002255 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | lbp-2 encodes a homolog of the novel fatty acid binding protein, As-p18, found in the parasitic nematode Ascaris suum; As-p18 is a member of a family of small intracellular fatty acid binding proteins (iFABPs); the expression pattern of lpb-2 is consistent with it being secreted into the perienteric fluid where it may play a role in lipid transport beween the intestine and body wall; a lbp-2 promoter::gfp fusion reporter is restricted to body wall muscle cells abutting the pseudocoelom. | Paper_evidence | WBPaper00003911 | |||||
WBPaper00012717 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable lipid binding activity. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F40F4.2 | |||||||
Corresponding_transcript (2) | |||||||||
Other_sequence (22) | |||||||||
Associated_feature | WBsf647927 | ||||||||
WBsf235463 | |||||||||
WBsf235464 | |||||||||
Experimental_info | RNAi_result (8) | ||||||||
Expr_pattern | Expr1028663 | ||||||||
Expr1150731 | |||||||||
Expr2013019 | |||||||||
Expr2031251 | |||||||||
Drives_construct | WBCnstr00036357 | ||||||||
Construct_product | WBCnstr00036357 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (205) | |||||||||
Interaction (263) | |||||||||
Map_info | Map | X | Position | -10.6457 | |||||
Positive | Positive_clone | F40F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |