WormBase Tree Display for Gene: WBGene00001790
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WBGene00001790 | Evidence | Person_evidence | WBPerson1846 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | D1053 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gst | ||||||
Allele (32) | |||||||
Strain | WBStrain00033920 | ||||||
WBStrain00032388 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Ortholog (32) | |||||||
Paralog | WBGene00021817 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00001791 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00001365 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001371 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001792 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008920 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00015337 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016204 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019636 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00043097 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | gst-42 is orthologous to the human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known as MALEYLACETOACETATE ISOMERASE; GSTZ1; OMIM:603758), which when mutated is thought to lead to a variety of type I tyrosinemia. | Curator_confirmed | WBPerson1823 | |||
WBPerson567 | |||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables identical protein binding activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to be located in mitochondrion. Expressed in intestine. Is an ortholog of human GSTZ1 (glutathione S-transferase zeta 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D1053.1 | |||||
Corresponding_transcript | D1053.1.1 | ||||||
Other_sequence (27) | |||||||
Associated_feature | WBsf654443 | ||||||
WBsf671056 | |||||||
WBsf671057 | |||||||
WBsf1007098 | |||||||
WBsf1023927 | |||||||
WBsf237997 | |||||||
WBsf237998 | |||||||
WBsf237999 | |||||||
WBsf238000 | |||||||
WBsf238001 | |||||||
Experimental_info | RNAi_result | WBRNAi00115551 | Inferred_automatically | RNAi_primary | |||
WBRNAi00043381 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030339 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115488 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012524 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram232 | ||||||
Expr3792 | |||||||
Expr1015984 | |||||||
Expr1031053 | |||||||
Expr1147367 | |||||||
Expr2012325 | |||||||
Expr2030562 | |||||||
Drives_construct | WBCnstr00001071 | ||||||
WBCnstr00011663 | |||||||
WBCnstr00015944 | |||||||
WBCnstr00036682 | |||||||
Construct_product | WBCnstr00036682 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (204) | |||||||
Interaction (60) | |||||||
Map_info | Map | X | Position | 6.53295 | Error | 0.086971 | |
Positive | Positive_clone | D1053 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006465 | ||||||
WBPaper00031468 | |||||||
WBPaper00032062 | |||||||
WBPaper00035663 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00057218 | |||||||
WBPaper00065140 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |