WormBase Tree Display for Gene: WBGene00001639
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| WBGene00001639 | SMap | S_parent | Sequence | M01F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gly-14 | Person_evidence | WBPerson228 | |||||
| Sequence_name | M01F1.1 | ||||||||
| Molecular_name | M01F1.1 | ||||||||
| M01F1.1.1 | |||||||||
| CE01029 | |||||||||
| Other_name | CELE_M01F1.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gly-14 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gly | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00031628 | ||||||||
| WBStrain00000249 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00001637 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001638 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016402 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | gly-14 encodes a UDP-N-acetyl-D-glucosamine:alpha-3-D-mannoside beta-1, 2-N-acetylglucosaminyltransferase I (GnT 1); GLY-14 exhibits GnT 1 activity when assayed in vitro; a gly-14::lacZ reporter construct is expressed only in the intestine throughout larval and adult stages, with expression generally restricted to the anterior and posterior gut cells; a gly-14 deletion allele is phenotypically normal, even when in combination with a gly-12 mutation. | Paper_evidence | WBPaper00003352 | |||||
| WBPaper00005889 | |||||||||
| WBPaper00005927 | |||||||||
| WBPaper00005572 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 10 Apr 2012 00:00:00 | ||||||||
| Automated_description | Enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity. Involved in protein N-linked glycosylation. Located in perinuclear region of cytoplasm. Is an ortholog of human MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01F1.1 | |||||||
| Corresponding_transcript | M01F1.1.1 | ||||||||
| Other_sequence | AF082012 | ||||||||
| XIC02636_1 | |||||||||
| JI170365.1 | |||||||||
| CR06043 | |||||||||
| XI03197 | |||||||||
| CRC08308_1 | |||||||||
| SS01947 | |||||||||
| SSC00499_1 | |||||||||
| CBC16606_1 | |||||||||
| Associated_feature | WBsf991788 | ||||||||
| WBsf991789 | |||||||||
| WBsf991790 | |||||||||
| WBsf1014575 | |||||||||
| WBsf226351 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017102 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007027 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050765 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027852 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050766 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094958 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065496 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr654 | ||||||||
| Expr655 | |||||||||
| Expr656 | |||||||||
| Expr1021357 | |||||||||
| Expr1154462 | |||||||||
| Expr2012136 | |||||||||
| Expr2030372 | |||||||||
| Drives_construct | WBCnstr00012477 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (17) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | III | Position | -6.38882 | Error | 0.063634 | |||
| Positive | Positive_clone | M01F1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4362 | |||||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
