WormBase Tree Display for Gene: WBGene00001637
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| WBGene00001637 | SMap | S_parent | Sequence | F48E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gly-12 | Person_evidence | WBPerson228 | |||||
| Sequence_name | F48E3.1 | ||||||||
| Molecular_name | F48E3.1 | ||||||||
| F48E3.1.1 | |||||||||
| CE28401 | |||||||||
| F48E3.1.2 | |||||||||
| F48E3.1.3 | |||||||||
| Other_name | CELE_F48E3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gly-12 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gly | ||||||||
| Allele (85) | |||||||||
| Strain | WBStrain00002770 | ||||||||
| WBStrain00002771 | |||||||||
| WBStrain00031774 | |||||||||
| WBStrain00000248 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00001639 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001638 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016402 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | gly-12 encodes an experimentally verified UDP-N-acetylglucosamine alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I (GnT I), expressed throughout development in many cell types; a deletion allele of gly-12 is phenotypically normal even as a double or triple mutant with gly-13 and gly-14. | Paper_evidence | WBPaper00003352 | |||||
| WBPaper00005889 | |||||||||
| WBPaper00005927 | |||||||||
| WBPaper00024538 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 23 Aug 2006 00:00:00 | ||||||||
| Automated_description | Enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity. Involved in protein N-linked glycosylation. Located in perinuclear region of cytoplasm. Expressed in body wall musculature; ganglia; hypodermis; and intestine. Is an ortholog of human MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48E3.1 | |||||||
| Corresponding_CDS_history | F48E3.1b:wp271 | ||||||||
| Corresponding_transcript | F48E3.1.1 | ||||||||
| F48E3.1.2 | |||||||||
| F48E3.1.3 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf648310 | ||||||||
| WBsf662970 | |||||||||
| WBsf662971 | |||||||||
| WBsf662972 | |||||||||
| WBsf1005855 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032483 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000768 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047740 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00003297 | ||||||||
| WBCnstr00003298 | |||||||||
| WBCnstr00012474 | |||||||||
| WBCnstr00036807 | |||||||||
| Construct_product | WBCnstr00036807 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction | WBInteraction000126352 | ||||||||
| WBInteraction000126354 | |||||||||
| WBInteraction000126356 | |||||||||
| WBInteraction000127247 | |||||||||
| WBInteraction000257914 | |||||||||
| WBInteraction000260646 | |||||||||
| WBInteraction000399075 | |||||||||
| WBInteraction000442846 | |||||||||
| WBInteraction000446138 | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | X | Position | -1.66589 | Error | 0.002603 | |||
| Positive | Positive_clone | F48E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4360 | |||||||
| 4486 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
