WormBase Tree Display for Gene: WBGene00001501
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WBGene00001501 | SMap | S_parent | Sequence | D1037 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ftn | ||||||
Allele (16) | |||||||
Strain | WBStrain00002965 | ||||||
WBStrain00031408 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Ortholog (74) | |||||||
Paralog | WBGene00001500 | Caenorhabditis elegans | From_analysis (4) | ||||
Structured_description | Concise_description | ftn-2 encodes one of two C. elegans ferritin heavy chain homologs; loss of ftn-2 activity via deletion mutation results in slightly lower brood sizes and, under iron stress conditions, slightly faster growth from the L4 to adult stage of development, and slightly reduced lifespan; an ftn-2::gfp reporter fusion is expressed in diverse tissues, including the pharynx, intestine, and hypodermis, and its expression, along with that of ftn-2 mRNA, does not appear to change significantly under iron stress conditions. | Paper_evidence | WBPaper00005703 | |||
WBPaper00006525 | |||||||
WBPaper00024456 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson1823 | |||||||
WBPerson567 | |||||||
Date_last_updated | 10 Mar 2006 00:00:00 | ||||||
Automated_description | Enables identical protein binding activity. Involved in defense response to Gram-positive bacterium. Predicted to be located in cytoplasm. Expressed in body wall musculature and hypodermis. Human ortholog(s) of this gene implicated in several diseases, including hemochromatosis type 5; hyperferritinemia-cataract syndrome; and neurodegeneration with brain iron accumulation 3. Is an ortholog of human FTMT (ferritin mitochondrial). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0111256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||
DOID:1289 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||
DOID:0111031 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3976) | ||||
DOID:0080600 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3976,HGNC:3999) | ||||
DOID:0110737 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||
DOID:679 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3999) | ||||
Molecular_info | Corresponding_CDS | D1037.3 | |||||
Corresponding_transcript | D1037.3.1 | ||||||
Other_sequence (155) | |||||||
Associated_feature (16) | |||||||
Experimental_info | RNAi_result | WBRNAi00089360 | Inferred_automatically | RNAi_primary | |||
WBRNAi00102059 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00116826 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033297 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00102060 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003267 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00069754 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043364 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00067721 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089349 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1229 | ||||||
Expr3081 | |||||||
Expr4744 | |||||||
Expr5610 | |||||||
Expr7855 | |||||||
Expr1022759 | |||||||
Expr1030901 | |||||||
Expr1147349 | |||||||
Expr2011914 | |||||||
Expr2030151 | |||||||
Drives_construct | WBCnstr00003471 | ||||||
WBCnstr00009029 | |||||||
WBCnstr00011121 | |||||||
WBCnstr00012954 | |||||||
WBCnstr00016205 | |||||||
WBCnstr00036907 | |||||||
Construct_product | WBCnstr00011121 | ||||||
WBCnstr00036907 | |||||||
Antibody | WBAntibody00002946 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (215) | |||||||
Interaction (202) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
WBbiopr:00000096 | |||||||
Map_info | Map | I | Position | -2.93309 | Error | 0.018064 | |
Positive | Positive_clone | D1037 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4327 | |||||
4429 | |||||||
4670 | |||||||
Pseudo_map_position | |||||||
Reference (21) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |