WormBase Tree Display for Gene: WBGene00001246
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| WBGene00001246 | SMap | S_parent | Sequence | Y47D3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | elo-8 | Person_evidence | WBPerson79 | |||||
| Sequence_name | Y47D3A.30 | ||||||||
| Molecular_name | Y47D3A.30a | ||||||||
| Y47D3A.30a.1 | |||||||||
| CE46048 | |||||||||
| Y47D3A.30b | |||||||||
| CE46115 | |||||||||
| Y47D3A.30b.1 | |||||||||
| Other_name | CELE_Y47D3A.30 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | elo-8 | ||||||||
| DB_info | Database | AceView | gene | 3M318 | |||||
| WormQTL | gene | WBGene00001246 | |||||||
| WormFlux | gene | WBGene00001246 | |||||||
| NDB | locus_tag | CELE_Y47D3A.30 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001246|UniProtKB=F3Y5R4 | |||||||
| family | PTHR11157 | ||||||||
| NCBI | gene | 259739 | |||||||
| RefSeq | protein | NM_001268181.4 | |||||||
| NM_001268182.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF106467 | |||||||
| TrEMBL | UniProtAcc | F3Y5R4 | |||||||
| F3Y5R6 | |||||||||
| UniProt_GCRP | UniProtAcc | F3Y5R4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 28 Mar 2011 09:48:15 | WBPerson1983 | Event | Split_into | WBGene00206461 | ||||
| Split_into | WBGene00206461 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elo | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00001239 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001241 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00001242 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00001243 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00001244 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001245 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00001247 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Concise_description | The elo-8 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; elo-8 has no known function in vivo. | Paper_evidence | WBPaper00004162 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D3A.30a | |||||||
| Y47D3A.30b | |||||||||
| Corresponding_CDS_history | Y47D3A.30:wp196 | ||||||||
| Y47D3A.30:wp225 | |||||||||
| Corresponding_transcript | Y47D3A.30a.1 | ||||||||
| Y47D3A.30b.1 | |||||||||
| Associated_feature | WBsf227558 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020697 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114851 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114845 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028318 | ||||||||
| Expr1160214 | |||||||||
| Expr2011285 | |||||||||
| Expr2029521 | |||||||||
| Microarray_results | SMD_Y47D3A.P | ||||||||
| 186196_s_at | |||||||||
| Aff_Y47D3A.P | |||||||||
| GPL19516_CGZ0046917 | |||||||||
| GPL19516_CGZ0046918 | |||||||||
| GPL21109_Y47D3A.30a | |||||||||
| GPL21109_Y47D3A.30b | |||||||||
| GPL8673_Y47D3A_30P00619 | |||||||||
| GPL8673_Y47D3A_30P01032 | |||||||||
| Expression_cluster (139) | |||||||||
| Map_info | Map | III | Position | 7.73047 | Error | 0.098191 | |||
| Positive | Positive_clone | Y47D3A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024532 | ||||||||
| WBPaper00029292 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00064105 | |||||||||
| WBPaper00065988 | |||||||||
| Remark | Sequence connection updated based on email from [Schwarz EM]. Previously connected to Y47D3A.14 but this was split into two genes, with elo-8 reassigned to the new gene. [krb 02/04/04] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
