WormBase Tree Display for Gene: WBGene00001025
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WBGene00001025 | SMap | S_parent | Sequence | C55B6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dnj-7 | Person_evidence | WBPerson625 | |||||
Sequence_name | C55B6.2 | ||||||||
Molecular_name | C55B6.2 | ||||||||
C55B6.2.1 | |||||||||
CE09008 | |||||||||
Other_name | CELE_C55B6.2 | Accession_evidence | NDB | BX284606 | |||||
Public_name | dnj-7 | ||||||||
DB_info | Database | AceView | gene | XH815 | |||||
WormQTL | gene | WBGene00001025 | |||||||
WormFlux | gene | WBGene00001025 | |||||||
NDB | locus_tag | CELE_C55B6.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001025|UniProtKB=P91189 | |||||||
family | PTHR24074 | ||||||||
NCBI | gene | 180983 | |||||||
RefSeq | protein | NM_076808.7 | |||||||
TREEFAM | TREEFAM_ID | TF105162 | |||||||
TrEMBL | UniProtAcc | P91189 | |||||||
UniProt_GCRP | UniProtAcc | P91189 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dnj | ||||||||
Allele (69) | |||||||||
Strain | WBStrain00001214 | ||||||||
WBStrain00036236 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00050221 | ||||||||
00050222 | |||||||||
00050223 | |||||||||
00050224 | |||||||||
00050225 | |||||||||
00050226 | |||||||||
00050227 | |||||||||
00105805 | |||||||||
00105815 | |||||||||
Contained_in_operon | CEOPX167 | ||||||||
Ortholog (39) | |||||||||
Paralog (11) | |||||||||
Structured_description | Concise_description | dnj-7 encodes a protein containing a DnaJ domain that is orthologous to vertebrate P58IPK/DNAJC3, peripheral membrane proteins of the rough endoplasmic reticulum (ER) that function in co-translocational ER protein degradation during ER stress; in C. elegans, loss of dnj-7 activity via RNAi results in increased expression of an hsp-4::gfp (BiP) stress-inducible reporter fusion, suggesting that dnj-7 functions to regulate ER homeostasis. | Paper_evidence | WBPaper00012768 | |||||
WBPaper00012859 | |||||||||
WBPaper00025202 | |||||||||
WBPaper00032192 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 01 Oct 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable misfolded protein binding activity; protein kinase inhibitor activity; and protein-folding chaperone binding activity. Involved in PERK-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum lumen. Expressed in head. Is an ortholog of human DNAJC3 (DnaJ heat shock protein family (Hsp40) member C3). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result (14) | ||||||||
Expr_pattern | Chronogram2050 | ||||||||
Expr5591 | |||||||||
Expr1021713 | |||||||||
Expr1030637 | |||||||||
Expr1147199 | |||||||||
Expr2011010 | |||||||||
Expr2029248 | |||||||||
Drives_construct | WBCnstr00002107 | ||||||||
WBCnstr00037135 | |||||||||
Construct_product | WBCnstr00037135 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (144) | |||||||||
Interaction (37) | |||||||||
WBProcess | WBbiopr:00000046 | ||||||||
WBbiopr:00000079 | |||||||||
Map_info | Map | X | Position | -1.79986 | Error | 0.003872 | |||
Positive | Positive_clone | C55B6 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5572 | |||||||
5612 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005432 | ||||||||
WBPaper00025202 | |||||||||
WBPaper00031857 | |||||||||
WBPaper00032192 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00062289 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |