WormBase Tree Display for Gene: WBGene00001007
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WBGene00001007 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | dli-1 | Person_evidence | WBPerson237 | |||||
Sequence_name | C39E9.14 | ||||||||
Molecular_name | C39E9.14a | ||||||||
C39E9.14a.1 | |||||||||
CE30892 | |||||||||
C39E9.14b | |||||||||
CE30893 | |||||||||
C39E9.14b.1 | |||||||||
Other_name | CELE_C39E9.14 | Accession_evidence | NDB | BX284604 | |||||
Public_name | dli-1 | ||||||||
DB_info | Database | AceView | gene | 4N862 | |||||
WormQTL | gene | WBGene00001007 | |||||||
WormFlux | gene | WBGene00001007 | |||||||
NDB | locus_tag | CELE_C39E9.14 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001007|UniProtKB=G5ED34 | |||||||
family | PTHR12688 | ||||||||
NCBI | gene | 178260 | |||||||
RefSeq | protein | NM_070117.10 | |||||||
NM_070118.7 | |||||||||
TREEFAM | TREEFAM_ID | TF314138 | |||||||
TrEMBL | UniProtAcc | G5ECK7 | |||||||
G5ED34 | |||||||||
UniProt_GCRP | UniProtAcc | G5ED34 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dli | ||||||||
Allele (34) | |||||||||
Strain | WBStrain00026521 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (45) | |||||||||
Paralog | WBGene00006960 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Structured_description | Concise_description | dli-1 encodes a dynein light intermediate chain; dli-1 activity, presumably as part of a cytoplasmic dynein minus-end-directed motor complex, is required for mitoses throughout development, for pronuclear and nuclear migration, and for normal neuronal function; DLI-1 has been shown to physically interact with the ZYG-12 HOOK-domain containing protein and the UNC-16 JIP3 (c-Jun N-terminal kinase (JNK)-interacting protein 3) protein. | Paper_evidence | WBPaper00004901 | |||||
WBPaper00006310 | |||||||||
WBPaper00006494 | |||||||||
WBPaper00038128 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 09 Mar 2011 00:00:00 | ||||||||
Automated_description | Predicted to enable dynein heavy chain binding activity. Involved in regulation of dendrite morphogenesis and retrograde axonal transport. Located in microtubule plus-end and neuron projection. Expressed in ciliated neurons; hypodermis; and pharynx. Is an ortholog of human DYNC1LI2 (dynein cytoplasmic 1 light intermediate chain 2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C39E9.14a | |||||||
C39E9.14b | |||||||||
Corresponding_transcript | C39E9.14a.1 | ||||||||
C39E9.14b.1 | |||||||||
Other_sequence (49) | |||||||||
Associated_feature | WBsf652325 | ||||||||
WBsf981838 | |||||||||
WBsf998329 | |||||||||
WBsf231085 | |||||||||
WBsf231086 | |||||||||
WBsf231087 | |||||||||
WBsf231088 | |||||||||
Experimental_info (8) | |||||||||
Map_info | Map | IV | Position | 7.91039 | Error | 0.026329 | |||
Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4862 | |||||||
4831 | |||||||||
4871 | |||||||||
Pseudo_map_position | |||||||||
Reference (18) | |||||||||
Remark | Sequence connection from [Yoder J, Han M] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |