WormBase Tree Display for Gene: WBGene00000221
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WBGene00000221 | SMap | S_parent | Sequence | T04C10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | atf-4 | |||||
Sequence_name | T04C10.4 | ||||||
Molecular_name | T04C10.4 | ||||||
T04C10.4.1 | |||||||
CE06355 | |||||||
Other_name | atf-5 | ||||||
CELE_T04C10.4 | Accession_evidence | NDB | BX284606 | ||||
Public_name | atf-4 | ||||||
DB_info | Database | AceView | gene | XP428 | |||
WormQTL | gene | WBGene00000221 | |||||
WormFlux | gene | WBGene00000221 | |||||
NDB | locus_tag | CELE_T04C10.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00000221|UniProtKB=Q22156 | |||||
family | PTHR13044 | ||||||
NCBI | gene | 181576 | |||||
RefSeq | protein | NM_001420580.1 | |||||
SwissProt | UniProtAcc | Q22156 | |||||
TREEFAM | TREEFAM_ID | TF318507 | |||||
UniProt_GCRP | UniProtAcc | Q22156 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | atf | ||||||
Allele (54) | |||||||
Strain | WBStrain00031503 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (16) | |||||||
Ortholog (24) | |||||||
Paralog | WBGene00012330 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00007932 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00013878 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00077761 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description (2) | |||||||
Disease_info | Potential_model | DOID:10286 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:786) | ||
Molecular_info | Corresponding_CDS | T04C10.4 | |||||
Corresponding_CDS_history | T04C10.4a:wp264 | ||||||
T04C10.4b:wp264 | |||||||
Corresponding_transcript | T04C10.4.1 | ||||||
Other_sequence (24) | |||||||
Associated_feature | WBsf654606 | ||||||
WBsf978443 | |||||||
WBsf982291 | |||||||
WBsf1008012 | |||||||
WBsf1024465 | |||||||
WBsf238254 | |||||||
Transcription_factor | WBTranscriptionFactor000146 | ||||||
Experimental_info | RNAi_result | WBRNAi00018131 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035130 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000621 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052365 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092892 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr11023 | ||||||
Expr1020406 | |||||||
Expr1030138 | |||||||
Expr1155993 | |||||||
Expr2009480 | |||||||
Expr2027717 | |||||||
Drives_construct (2) | |||||||
Construct_product | WBCnstr00017860 | ||||||
WBCnstr00037651 | |||||||
Regulate_expr_cluster | WBPaper00062518:atf-4_regulated | ||||||
Microarray_results (19) | |||||||
Expression_cluster (175) | |||||||
Interaction (27) | |||||||
Map_info | Map | X | Position | 21.3687 | Error | 0.007883 | |
Positive | Positive_clone | T04C10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4483 | |||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |