WormBase Tree Display for Gene: WBGene00000185
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WBGene00000185 | SMap | S_parent | Sequence | F31A9 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | arg | ||||||
Allele (40) | |||||||
Strain | WBStrain00030577 | ||||||
WBStrain00030578 | |||||||
WBStrain00032982 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00021842 | ||||||
00021843 | |||||||
00021844 | |||||||
00106960 | |||||||
00106961 | |||||||
Ortholog | Csp5_scaffold_00906.g16631 | Caenorhabditis sinica | From_analysis | WormBase-Compara | |||
GCK72_025828 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Sp34_X0111600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
Sp34_X0126400 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
Sp34_X0151800 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
chrX_pilon.g18504 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00001609 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00004963 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019901 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00001148 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018041 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012917 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021400 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | arg-1 encodes a member of the Delta/Serrate/LAG-2 family of transmembrane signaling ligands; arg-1 mediates cell fate decisions during early embryogenesis and in addition, is a downstream target of HLH-8/CeTwist, which binds E box sequences in the arg-1 promoter and is required for fate specification of a subset of mesodermal cells; arg-1 is closely related to apx-1 and lag-2 and is functionally interchangeable with them; an arg-1::gfp reporter is expressed in the vm1 vulval muscles, the intestinal, anal depressor, and anal sphincter muscles, and the head mesoderm cell. | Paper_evidence | WBPaper00002357 | |||
WBPaper00002479 | |||||||
WBPaper00027104 | |||||||
WBPaper00029191 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson324 | |||||||
Date_last_updated | 21 Mar 2007 00:00:00 | ||||||
Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in cell communication. Predicted to be located in membrane. Expressed in several structures, including head mesodermal cell; male distal tip cell; non-striated muscle; somatic gonad precursor; and tail. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F31A9.3 | |||||
Corresponding_CDS_history (2) | |||||||
Corresponding_transcript | F31A9.3.1 | ||||||
Associated_feature (14) | |||||||
Experimental_info | RNAi_result (21) | ||||||
Expr_pattern (11) | |||||||
Drives_construct | WBCnstr00000220 | ||||||
WBCnstr00000221 | |||||||
WBCnstr00000684 | |||||||
WBCnstr00006548 | |||||||
WBCnstr00010979 | |||||||
WBCnstr00013468 | |||||||
WBCnstr00037678 | |||||||
Construct_product | WBCnstr00037678 | ||||||
Microarray_results (26) | |||||||
Expression_cluster (72) | |||||||
Interaction (71) | |||||||
WBProcess | WBbiopr:00000072 | ||||||
Map_info | Map | X | Position | -17.544 | Error | 0.021534 | |
Positive | Positive_clone | F31A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
JP#L223 | |||||||
Pseudo_map_position | |||||||
Reference (24) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |