WormBase Tree Display for Gene: WBGene00002254
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| WBGene00002254 | SMap | S_parent | Sequence | F40F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lbp-2 | Person_evidence | WBPerson492 | |||||
| Sequence_name | F40F4.2 | ||||||||
| Molecular_name | F40F4.2 | ||||||||
| F40F4.2.1 | |||||||||
| CE04532 | |||||||||
| F40F4.2.2 | |||||||||
| Other_name | CELE_F40F4.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lbp-2 | ||||||||
| DB_info | Database | AceView | gene | XD881 | |||||
| WormQTL | gene | WBGene00002254 | |||||||
| WormFlux | gene | WBGene00002254 | |||||||
| NDB | locus_tag | CELE_F40F4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002254|UniProtKB=Q20224 | |||||||
| family | PTHR22725 | ||||||||
| NCBI | gene | 180617 | |||||||
| RefSeq | protein | NM_076157.10 | |||||||
| SwissProt | UniProtAcc | Q20224 | |||||||
| UniProt_GCRP | UniProtAcc | Q20224 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lbp | ||||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067530 | ||||||||
| 00067531 | |||||||||
| 00067532 | |||||||||
| 00110319 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00002253 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00002259 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00002257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00002260 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021486 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00002256 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00002255 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | lbp-2 encodes a homolog of the novel fatty acid binding protein, As-p18, found in the parasitic nematode Ascaris suum; As-p18 is a member of a family of small intracellular fatty acid binding proteins (iFABPs); the expression pattern of lpb-2 is consistent with it being secreted into the perienteric fluid where it may play a role in lipid transport beween the intestine and body wall; a lbp-2 promoter::gfp fusion reporter is restricted to body wall muscle cells abutting the pseudocoelom. | Paper_evidence | WBPaper00003911 | |||||
| WBPaper00012717 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable lipid binding activity. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40F4.2 | |||||||
| Corresponding_transcript (2) | |||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf647927 | ||||||||
| WBsf235463 | |||||||||
| WBsf235464 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070738 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088955 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001625 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046864 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014656 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032031 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028663 | ||||||||
| Expr1150731 | |||||||||
| Expr2013019 | |||||||||
| Expr2031251 | |||||||||
| Drives_construct | WBCnstr00036357 | ||||||||
| Construct_product | WBCnstr00036357 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction (263) | |||||||||
| Map_info | Map | X | Position | -10.6457 | |||||
| Positive | Positive_clone | F40F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003911 | ||||||||
| WBPaper00006047 | |||||||||
| WBPaper00012717 | |||||||||
| WBPaper00023807 | |||||||||
| WBPaper00025114 | |||||||||
| WBPaper00026629 | |||||||||
| WBPaper00026640 | |||||||||
| WBPaper00026800 | |||||||||
| WBPaper00027024 | |||||||||
| WBPaper00041973 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
