WormBase Tree Display for Gene: WBGene00143109

WBGene00143109 SMap: S_parent: Sequence: Cbre_Contig13
  Identity: Version: 2
    Name: CGC_name: Cbn-sly-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN04384
      Molecular_name: CBN04384
        CBN04384.1
        CN22713
      Public_name: Cbn-sly-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 07 Jun 2016 16:56:40 WBPerson2970 Name_change: CGC_name: Cbn-sly-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sly
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 14.9163 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        29.8326 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 10.5673 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        11.4291 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        14.8082 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        7.8181 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.94161 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 25.5357 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        27.146 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        28.7563 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 18.6466 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        18.7308 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00205690
    Ortholog (34)
    Paralog: WBGene00141342 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00147637 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00147851 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00152678 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00155616 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00161372 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193355 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans sly-1. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN04384
    Corresponding_transcript: CBN04384.1
    Other_sequence: CBC17061_1
      Tcir_isotig22142
      FC555386.1
      FG620988.1
      Name_isotig05938
      GR13878
      BUC02348_1
      XI03235
      PSC03330_1
      SRC00270_1
      EX502228.1
      FK805272.1
      Acan_isotig20693
      Acan_isotig06203
      FC814900.1
      AIC00115_1
      XIC02701_1
      AE03586
      JI168761.1
      MHC01476_1
      HBC14144_1
      EX559811.1
      TM03201
      GW408508.1
      Acan_isotig06202
      EY460275.1
      FC809593.1
      PPC12706_1
      DN557323.1
      ACC28995_1
      HG09472
      GW412906.1
      TMC00504_1
      MH01939
      MH00467
      MHC01688_1
      EY461766.1
      Oden_isotig14402
      SR05266
      ACC08611_1
      EF066644.1
      EX916605.1
      JI459170.1
      EH005523.1
      FC814809.1
      FC809517.1
      ACC17522_1
      Tcol_isotig17059
      Dviv_isotig23207
      TMC01927_1
      EX555132.1
      FK807278.1
      PSC01877_1
      SR00271
      Hbac_isotig04617
      PVC03320_1
      AYC02360_1
      SRC07666_1
      TM00869
      EL890337.1
      HGC05265_1
      TSC07412_1
      Oden_isotig14403
      GRC03139_1
      LSC00552_1
      SRC06860_1
  Experimental_info: Microarray_results: GPL14142_CBN04384_678-737_0.831_65_C
      GPL14142_CBN04384_926-985_0.855_46_A
      GPL14142_CBN04384_961-1020_0.873_34_B
  Method: Gene