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WormBase Tree Display for Gene: WBGene00006929

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Name Class

WBGene00006929SMapS_parentSequenceC04F6
IdentityVersion1
NameCGC_namevit-5Person_evidenceWBPerson71
Sequence_nameC04F6.1
Molecular_nameC04F6.1
C04F6.1.1
CE03921
Other_nameCELE_C04F6.1Accession_evidenceNDBBX284606
Public_namevit-5
DB_infoDatabaseAceViewgeneXE27
WormQTLgeneWBGene00006929
WormFluxgeneWBGene00006929
NDBlocus_tagCELE_C04F6.1
PanthergeneCAEEL|WormBase=WBGene00006929|UniProtKB=P06125
familyPTHR23345
NCBIgene180630
RefSeqproteinNM_076188.7
SwissProtUniProtAccP06125
TREEFAMTREEFAM_IDTF332911
UniProt_GCRPUniProtAccP06125
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvit
Allele (77)
Legacy_informationStructural gene for vitellogenin yp170A; completely sequenced.
[C.elegansII] NMK. 4.9 kb transcript, specific to adult hermaphrodite intestine, encodes 1603 aa vitellogenin yp170A. [Spieth et al. 1985; BL]
Strain (2)
RNASeq_FPKM (74)
GO_annotation00038899
00038900
00038901
00038902
00115042
00115043
Ortholog (92)
ParalogWBGene00006925Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006926Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006927Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006928Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006930Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionvit-5 encodes a vitellogenin, a lipid-binding protein precursor related to vertebrate vitellogenins and mammalian ApoB-100, a core LDL particle constituent; by homology, VIT-5 is predicted to function as a lipid transport protein; loss of vit-5 activity via large-scale RNA-mediated interference (RNAi) screens indicates that VIT-5 is required for embryogenesis and normal rates of postembryonic growth; VIT-5 is a major yolk component and is expressed exclusively in the adult hermaphrodite intestine from which it is secreted into the pseudocoelomic space and taken up by oocytes.Paper_evidenceWBPaper00000808
WBPaper00005654
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Predicted to be located in extracellular region.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC04F6.1
Corresponding_transcriptC04F6.1.1
Other_sequenceFG978927.1
FK804862.1
JI164316.1
FK801796.1
FK803179.1
HC02465
FK805655.1
FF678477.1
JI173075.1
GO254661.1
HCC00990_3
FK803103.1
CBC10244_1
FK804773.1
HCC00998_1
GO254650.1
FK807441.1
FF678732.1
FK802356.1
FK802328.1
FK803433.1
HCC04503_1
FK803689.1
FK804695.1
FK808127.1
HC00757
HCC03171_1
FK806111.1
FK808047.1
FG975274.1
FK801874.1
FK809680.1
FK800448.1
CRC07853_1
FK810035.1
FK809687.1
FG976027.1
FG980580.1
FG977845.1
FK800609.1
FK804801.1
FK800545.1
Tcir_isotig12963
EX912588.1
JI164265.1
FK803476.1
FK801222.1
AJ616352.1
FK808335.1
FF679285.1
FK806215.1
FK804417.1
FK800566.1
FK804392.1
FK801644.1
FK808649.1
FK809428.1
FK804373.1
FK800424.1
HCC04473_1
FK801045.1
FG980301.1
FF679068.1
FK804856.1
FK804423.1
FK803646.1
GO254616.1
FK802195.1
HC02377
FK805245.1
FK805986.1
HC00043
CR03735
FK806257.1
FK807794.1
HCC00990_4
TIC00130_1
FK802581.1
FF678547.1
FK808344.1
AE00134
FK806909.1
EX914586.1
FG973674.1
FK804164.1
FK809354.1
CGC01216_1
FK803635.1
TIC00054_1
AA423788.1
FK806538.1
FK802729.1
FK806389.1
CGC00006_1
CR00102
HBC26393_1
FK809710.1
FK807251.1
HC06363
OOC00076_1
FK808850.1
FK800451.1
FK800962.1
HCC00998_2
FK806671.1
FG974105.1
FK802440.1
EX914902.1
FK803711.1
FK801061.1
CGC00601_1
FK803850.1
FG977818.1
HC02384
CR05241
FF678835.1
FK802183.1
FK806137.1
FG973725.1
FG977641.1
EX012053.1
FK805912.1
AJ616365.1
FK799860.1
FG977226.1
FF679188.1
FF679132.1
FK807545.1
FK803452.1
FK805504.1
AB549208.1
CRC10794_1
FG974584.1
HC01839
FK804548.1
FK809596.1
FK800167.1
FK804834.1
FK804952.1
CBC03937_1
HCC00990_2
FG978346.1
CR02309
FK809912.1
FG976314.1
AE01267
FK809628.1
Name_isotig01290
HCC03519_1
FK808326.1
EF552220.1
HC06624
FK809507.1
FK806068.1
FK806132.1
HC00028
HCC08325_1
FK799940.1
FK809469.1
HC02464
FK800284.1
FK805608.1
FK806371.1
FK806387.1
NB07875
FK806560.1
FG971365.1
FK806611.1
CR08766
EX910692.1
FK808435.1
EB763483.1
CGC00148_1
FK805693.1
FK809795.1
CGC00284_1
FK802981.1
FK803370.1
FK799883.1
HCC00998_3
FG978407.1
FF679439.1
PPC01481_1
NBC00182_1
FK800324.1
FK802790.1
FF679000.1
HC02438
FF679711.1
FK808046.1
FK808497.1
HC00798
FK805522.1
FF679258.1
FK804230.1
HC02091
FK801516.1
ASC31376_1
HC02467
FK806198.1
HC06845
FK808642.1
FK807888.1
FK804571.1
HBC00211_1
FK802509.1
CJC03257_1
FK807462.1
HC02409
FK804751.1
AE00307
AM157832.1
FK802481.1
Associated_featureWBsf1004607
Experimental_infoRNAi_result (43)
Expr_patternExpr5148
Expr10734
Expr16164
Expr1018292
Expr1032944
Expr1143744
Expr2018003
Expr2036140
Drives_constructWBCnstr00002527
WBCnstr00020075
WBCnstr00034091
WBCnstr00042811
Construct_productWBCnstr00034091
Regulate_expr_clusterWBPaper00064939:vit-5(RNAi)_downregulated
WBPaper00064939:vit-5(RNAi)_upregulated
Microarray_results (22)
Expression_cluster (324)
Interaction (207)
Map_infoMapXPosition-10.358Error0.005327
PositivePositive_cloneC04F6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (60)
Remark (2)
MethodGene