Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00006926

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00006926SMapS_parentSequenceC42D8
IdentityVersion1
NameCGC_namevit-2Person_evidenceWBPerson71
Sequence_nameC42D8.2
Molecular_nameC42D8.2
C42D8.2.1
CE06950
Other_nameCELE_C42D8.2Accession_evidenceNDBBX284606
Public_namevit-2
DB_infoDatabaseWormQTLgeneWBGene00006926
WormFluxgeneWBGene00006926
NDBlocus_tagCELE_C42D8.2
PanthergeneCAEEL|WormBase=WBGene00006926|UniProtKB=P05690
familyPTHR23345
NCBIgene180781
RefSeqproteinNM_076467.7
SwissProtUniProtAccP05690
UniProt_GCRPUniProtAccP05690
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvit
Allele (95)
Legacy_informationStructural gene for vitellogenin yp170B.
[C.elegansII] NMK. 4.9 kb transcript, specific to adult hermaphrodite intestine, encodes vitellogenin yp170B (67% identity to VIT-5). Extensive promoter analysis. [Speith et al. 1985b; MacMorris et al. 1994; BL]
Strain (11)
RNASeq_FPKM (74)
GO_annotation00038891
00038892
00038893
00038894
00038895
00038896
00038897
00038898
00115036
00115037
Ortholog (64)
ParalogWBGene00006925Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006927Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006929Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006930Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionvit-2 encodes the vitellogenin homolog YP170; vit-2 is expressed in the adult hermaphrodite intestine and VIT-2 is secreted into the pseudocoelomic space before being taken up by developing oocytes; vit-2 expression is regulated in a sex-, stage-, and tissue-specific manner by the ELT-2/GATA and MAB-3 transcription factors.Paper_evidenceWBPaper00003831
WBPaper00004538
WBPaper00032471
WBPaper00001864
WBPaper00003452
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated24 Mar 2014 00:00:00
Automated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Located in cytoplasmic vesicle; vesicle lumen; and yolk granule. Expressed in embryonic cell; gonad; intestine; oocyte; and pseudocoelom.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC42D8.2
Corresponding_CDS_history (2)
Corresponding_transcriptC42D8.2.1
Other_sequenceFK809933.1
FK800272.1
FD517601.1
FK801701.1
ES742560.1
CR09928
EX014450.1
DW718434.1
FK808439.1
FD516683.1
HC05898
FK802816.1
FK799908.1
FK805598.1
ODC00005_1
FK804875.1
CGC00273_1
HBC00925_1
CGC00191_1
FK804879.1
FK805772.1
FK802299.1
HC01946
FK808049.1
AE01238
CGC00035_1
CBC16296_1
FK806645.1
Tcol_isotig09396
CJC01859_1
FG976353.1
FG980787.1
CGC00104_1
AYC00174_1
HCC01082_1
HBC05021_1
TIC00063_1
EX007504.1
FK804908.1
FK801573.1
FK804509.1
FK808007.1
FK802615.1
FK802953.1
EX912009.1
FK801815.1
CRC03475_1
FK807513.1
CBC00514_1
CBC07611_1
FK803971.1
CGC01150_1
HC06905
ES740751.1
FK806423.1
CBC12773_1
ES412756.1
FK802889.1
FF678773.1
FK809650.1
CGC01187_1
CBC15934_1
EX009520.1
CGC00468_1
FF678383.1
Hbac_isotig00404
CGC00030_1
CRC01155_1
FK808907.1
FK802297.1
FK802829.1
CBC07730_1
FK807862.1
CBC00016_1
FF678157.1
FK807262.1
FK802970.1
FK805097.1
FK806727.1
GE625238.1
EG025418.1
HBC13945_1
FK800262.1
CR11979
EX007181.1
CSC02175_1
HCC06032_1
FK806819.1
ACC09895_2
FK806502.1
FK804702.1
EX010841.1
FD517614.1
FK803700.1
FK807600.1
FK800988.1
FK802305.1
CR02877
CR04077
FG972929.1
FK801330.1
FK808358.1
CGC00919_1
FK805054.1
CR10775
AYC00006_2
FK801744.1
ES411882.1
AE01364
FK804122.1
FK805956.1
AE01408
FF681815.1
FK803154.1
TIC00206_1
CRC03164_1
CGC00029_1
FK803559.1
FF678183.1
FK806806.1
CBC00016_2
HBC01006_2
FK806712.1
FK807509.1
FK804221.1
HC01376
FK806591.1
FF679220.1
FK809248.1
HCC03569_1
HC00748
FG980324.1
CR05410
FK807817.1
HC00693
FK804243.1
FK806932.1
CR12230
HC02506
FK804784.1
ACC09895_1
FF682133.1
Name_isotig01271
CR08731
FD514627.1
FK803054.1
FK807282.1
FK800436.1
FK804788.1
FK807557.1
FG975787.1
HCC03669_1
CBC09359_1
AJ616372.1
AYC00006_3
FK804806.1
CRC00023_2
CR09124
FF679666.1
EX015166.1
FK807502.1
AJ616358.1
CGC00477_1
FK809028.1
Oden_isotig21286
CR02831
FK808224.1
GE625639.1
CRC00023_1
FK801578.1
AE00548
CRC06861_1
FK804961.1
FF678984.1
CSC00767_1
FG974639.1
AM157825.1
CRC07906_1
FG978773.1
CRC03592_1
FG979945.1
FK809014.1
HC05310
CR07150
FK809549.1
FG979184.1
FK806614.1
CGC00566_1
FK809751.1
FF679020.1
FK804787.1
FG973155.1
AE02152
FK806971.1
FK802549.1
ES742022.1
FK805609.1
EX015075.1
FG974616.1
AYC00006_1
ES412468.1
HC07004
FK807712.1
ES410025.1
FK809598.1
FK804296.1
ACC23905_1
CBC05133_1
FK802902.1
AE01318
CBC03793_1
AM157837.1
FG980503.1
EX913186.1
ES744139.1
DW718242.1
DW718398.1
ES412978.1
PPC00531_1
FK808746.1
CRC06867_1
EX910170.1
FK809351.1
FG978235.1
FK800082.1
FK802735.1
ODC00046_1
FK805893.1
EX914988.1
FF678543.1
ES742349.1
FK806878.1
FK803445.1
FG973586.1
FG974414.1
AYC00006_4
HC00027
FF678315.1
CR08216
FF679085.1
FK804284.1
Hbac_isotig00403
FK809766.1
FG974672.1
FK804374.1
CR11642
FK800967.1
EX010259.1
FD516185.1
CR04956
FK804568.1
EX916431.1
FK803726.1
FK809083.1
CGC00050_1
FK803531.1
ES411977.1
ES742662.1
FK808871.1
CR07168
Tcol_isotig09397
FG970936.1
FK806945.1
AE02000
Associated_feature (19)
Experimental_infoRNAi_resultWBRNAi00095269Inferred_automaticallyRNAi_primary
WBRNAi00042364Inferred_automaticallyRNAi_primary
WBRNAi00095273Inferred_automaticallyRNAi_primary
WBRNAi00063230Inferred_automaticallyRNAi_primary
WBRNAi00001993Inferred_automaticallyRNAi_primary
WBRNAi00063231Inferred_automaticallyRNAi_primary
Expr_patternExpr520
Expr11396
Expr12138
Expr12674
Expr16161
Expr1015447
Expr1032943
Expr1146349
Expr2018001
Expr2036137
Drives_construct (19)
Construct_productWBCnstr00000145
WBCnstr00012417
WBCnstr00018820
WBCnstr00021273
WBCnstr00022596
WBCnstr00034094
WBCnstr00041719
Regulate_expr_clusterWBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
AntibodyWBAntibody00000018
Microarray_results (21)
Expression_cluster (320)
Interaction (317)
Map_infoMapXPosition-6.18804Error0.002606
PositivePositive_cloneC42D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
U32
Pseudo_map_position
Reference (114)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene