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WormBase Tree Display for Gene: WBGene00224746

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Name Class

WBGene00224746SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion5
NameSequence_nameBm4485
Molecular_nameBm4485a
Bm4485a.1
BM31541
Bm4485b
BM48532
Bm4485b.1
Other_nameTAG4485Curator_confirmedWBPerson4055
Bm1_32150Person_evidenceWBPerson5841
Public_nameBm4485
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:24WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameBma-fax-1
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
401 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameBma-fax-1
504 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKM (11)
GO_annotation00242180
00242181
00242182
00242183
OrthologWBGene00161243Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00034745Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g3075Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5290Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12356Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18991Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15603Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8604Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16734Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8388Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19094Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9157Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00388.g10149Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-fax-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16515Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01139.g18699Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00876Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024051Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01883Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16617Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0274400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00001400Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003701Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00052030Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00089818Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00126574Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrV_pilon.g17045Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g18717Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240517Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00264247Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287001Trichuris murisFrom_analysisWormBase-Compara
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans fax-1 and nhr-111. In C. elegans, fax-1 is involved in several processes, including neuron differentiation; positive regulation of transcription by RNA polymerase II; and regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm4485a
Bm4485b
Corresponding_transcriptBm4485a.1
Bm4485b.1
Other_sequenceSRC02099_1
Acan_isotig10071
EY464040.1
SR01788
FC815338.1
JO470231.1
JI475021.1
CRC12381_1
JI170219.1
SRC01676_1
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_F120_vs_F42
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:L4_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Micro_Upregulated
Remark[190208 pad] The CGC name Bma-fax-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Bma-fax-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene