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WormBase Tree Display for Gene: WBGene00161372

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Name Class

WBGene00161372SMapS_parentSequenceCbre_Contig143
IdentityVersion1
NameSequence_nameCBN22647
Molecular_nameCBN22647
CBN22647.1
CN27856
Public_nameCBN22647
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.67565From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
7.35129From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000241.57866From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
1.70454From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
1.7403From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.16008From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
2.82609From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000384.28247From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
6.01214From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
7.74181From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (16)
WBls:00001014.08969From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
4.60234From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00220541
OrthologWBGene00015130Caenorhabditis elegansFrom_analysisTreeFam
WBGene00016960Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00054122Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00069639Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00135975Caenorhabditis japonicaFrom_analysisTreeFam
CBOVI.g7842Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8045Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7612Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14312Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17481Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18187Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1554Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19716Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8696Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8701Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27532Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8507Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00243.g7721Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vps-33.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00362.g10149Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13721Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006298Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01884Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9170Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20275500Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00027015Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223230Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g4811Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240430Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00273338Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259095Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297701Trichuris murisFrom_analysisWormBase-Compara
WBGene00302063Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00141342Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00152678Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00193355Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00143109Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147637Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00147851Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155616Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.2. In C. elegans, vps-33.2 is involved in spermatocyte division.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN22647
Corresponding_CDS_historyCBN22647:np197
Corresponding_transcriptCBN22647.1
Other_sequence (2)
MethodGene